Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 101477 |
Name | oriT_FDAARGOS_1336|unnamed8 |
Organism | Klebsiella oxytoca strain FDAARGOS_1336 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_JAFFQV010000008 (3358..3417 [-], 60 nt) |
oriT length | 60 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_FDAARGOS_1336|unnamed8
GGGTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
GGGTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 1921 | GenBank | NZ_JAFFQV010000008 |
Plasmid name | FDAARGOS_1336|unnamed8 | Incompatibility group | ColRNAI |
Plasmid size | 4185 bp | Coordinate of oriT [Strand] | 3358..3417 [-] |
Host baterium | Klebsiella oxytoca strain FDAARGOS_1336 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |