Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 101425 |
| Name | oriT_pCRE28_5  |
| Organism | Klebsiella pneumoniae strain S27_CRE28 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_JAHBNV010000008 (1030..1080 [+], 51 nt) |
| oriT length | 51 nt |
| IRs (inverted repeats) | 6..13, 16..23 (GCAAAATT..AATTTTGC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 51 nt
>oriT_pCRE28_5
AATCTGCAAAATTTTAATTTTGCGTGGGGTGTGGGTATTTTTAGTGGTGAG
AATCTGCAAAATTTTAATTTTGCGTGGGGTGTGGGTATTTTTAGTGGTGAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 1869 | GenBank | NZ_JAHBNV010000008 |
| Plasmid name | pCRE28_5 | Incompatibility group | Col440I |
| Plasmid size | 2927 bp | Coordinate of oriT [Strand] | 1030..1080 [+] |
| Host baterium | Klebsiella pneumoniae strain S27_CRE28 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |