Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 101343 |
| Name | oriT_pSK12-01  |
| Organism | Cronobacter sakazakii strain SK012 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_JAXOAS010000015 (4423..4482 [-], 60 nt) |
| oriT length | 60 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_pSK12-01
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 1787 | GenBank | NZ_JAXOAS010000015 |
| Plasmid name | pSK12-01 | Incompatibility group | Col440II |
| Plasmid size | 4525 bp | Coordinate of oriT [Strand] | 4423..4482 [-] |
| Host baterium | Cronobacter sakazakii strain SK012 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |