Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   101279
Name   oriT_FEX725|unnamed3 in_silico
Organism   Escherichia coli strain FEX725
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_PSOV01000050 (1692..1773 [+], 82 nt)
oriT length   82 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 82 nt

>oriT_FEX725|unnamed3
GGGTGTCGGGGTGCAGCCCTGACCAGATGGCAATTGTGATAGCGTCGCGTGTGACGGTATTACAATTGCACATCCTGTCCCG

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   1723 GenBank   NZ_PSOV01000050
Plasmid name   FEX725|unnamed3 Incompatibility group   ColpVC
Plasmid size   2334 bp Coordinate of oriT [Strand]   1692..1773 [+]
Host baterium   Escherichia coli strain FEX725

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -