Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 101084
• Name: oriT_WB3|unnamed3
• Organism: Acinetobacter terrestris strain WB3
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_JASKNE010000008 (1..29 [-], 29 nt)
• oriT length: 29 nt
• IRs (inverted repeats): 1..6, 10..15 (GCAAAC..GTTTGC)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 29 nt

>oriT_WB3|unnamed3
GCAAACGAAGTTTGCATAAGTGCGCTCTT

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobQ_QOR41_RS16545_WB3|unnamed3

• ID: 1121
• GenBank: WP_284067933
• Name: mobQ_QOR41_RS16545_WB3|unnamed3
• UniProt ID: _
• Length: 478 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 478 a.a.
• Molecular weight: 55969.16 Da
• Isoelectric Point: 9.0671

>WP_284067933.1 MobQ family relaxase [Acinetobacter terrestris]
MAIYHFSVKTVARSAGRSATASIAYRAGEKIYCEREGKEHDYSRKTGVEYKEIYLPEGAPKHLKNREKLW
NEVEQRETRKNSTVAREFEIAFPSELNQEQRLAMLEELCSSIVERHQVAVDACVHAPHTGSGSDERNYHA
HILMSTRKLTPEGFTEKTRELDQKHSGEIEHWREHFADICNMHLDMAGFTERIDHRSYKDQENGLEATLH
EGPKVTELRRQGIETEISRTNDKIKQRNQIQLQYSKNMDMLIAENEIKLSTLKTEQQIQIKNSDKTPPID
EKALFEEKQRETLGKVLKREISAKDANLDLDFMQRNLKQAEINLTKHHKHQNEFNQQLAQEIVKSGLKQS
HDKLQSLVDQHNELTQNKPLLFGKKAWEAQRDAIYQEHKKLKGQHEHQKKDGVKDLLENEKFKEHAWKQY
QQQHPAKAKQYQTLYPSYQVIKKCVDEIKAEQQMKLRQEQQLKAQQHGPKMKSRGMSR

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (17-220)

Protein structure

No available structure.

Host bacterium

• ID: 1528
• GenBank: NZ_JASKNE010000008
• Plasmid name: WB3|unnamed3
• Incompatibility group: -
• Plasmid size: 11067 bp
• Coordinate of oriT [Strand]: 1..29 [-]
• Host baterium: Acinetobacter terrestris strain WB3

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -