Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 101055 |
| Name | oriT_Ea1-95|pEA6.0  |
| Organism | Erwinia amylovora strain Ea1-95 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_JAAEVV010000018 (1349..1408 [-], 60 nt) |
| oriT length | 60 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_Ea1-95|pEA6.0
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGACTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGACTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 1499 | GenBank | NZ_JAAEVV010000018 |
| Plasmid name | Ea1-95|pEA6.0 | Incompatibility group | Col440I |
| Plasmid size | 5950 bp | Coordinate of oriT [Strand] | 1349..1408 [-] |
| Host baterium | Erwinia amylovora strain Ea1-95 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |