Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 101000 |
| Name | oriT_P307  |
| Organism | Plasmid DEFINITION |
| Sequence Completeness | intact |
| NCBI accession of oriT (coordinates [strand]) | M62986 (_) |
| oriT length | 352 nt |
| IRs (inverted repeats) | |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note |
oriT sequence
Download Length: 352 nt
>oriT_P307
AGGTTGGTGGTTCTCACCACCAAAAGCACCACACCCTACGCAAAAACAAGTTTTTGCTGATTTGATTTTAATATCATGTGCTTATATTCATGAATTTATATTATTTAAATCAGATTTATTTAAACAGCGGTGCAGGCGCGGCTATGGCACCGTGTCTGCACCGCTTTGTAGGGGTGGTGCTGACTATTTTTATAAAAAACATTGTTTTATATTAGGGGGGGCTGCTAGCGGCGCGGTGTGTTTTTTTATAGGATACCGCCAGGGGCGCTGCTAGCGGTGCGTTCCTGTTTTCATTGTGAATTTTAGTGTTTCGAAATTAACTTTGTTTTATGTTTAAAAAAGGTAATCTCTA
AGGTTGGTGGTTCTCACCACCAAAAGCACCACACCCTACGCAAAAACAAGTTTTTGCTGATTTGATTTTAATATCATGTGCTTATATTCATGAATTTATATTATTTAAATCAGATTTATTTAAACAGCGGTGCAGGCGCGGCTATGGCACCGTGTCTGCACCGCTTTGTAGGGGTGGTGCTGACTATTTTTATAAAAAACATTGTTTTATATTAGGGGGGGCTGCTAGCGGCGCGGTGTGTTTTTTTATAGGATACCGCCAGGGGCGCTGCTAGCGGTGCGTTCCTGTTTTCATTGTGAATTTTAGTGTTTCGAAATTAACTTTGTTTTATGTTTAAAAAAGGTAATCTCTA
oriT secondary structure
Predicted by RNAfold.
Download structure file
Reference
[1] A Göldner et al. (1987) The origin of transfer of P307. Plasmid. 18(1):76-83. [PMID:2827206]
Host bacterium
| ID | 1459 | GenBank | M62986 |
| Plasmid name | P307 | Incompatibility group | - |
| Plasmid size | 2740 bp | Coordinate of oriT [Strand] | 735..1087 [+] |
| Host baterium | Plasmid DEFINITION |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |