Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 100998
• Name: oriT_pMOBQ4
• Sequence Completeness: intact
• NCBI accession of oriT (coordinates [strand]): -
• oriT length: 178 nt
• Location of nic site: _
• Conserved sequence flanking the nic site: _

oriT sequence

• Length: 178 nt

>oriT_pMOBQ4
GATGTAACTCCGTACGCGATGAAAAATCGCATTTTATCGCGTCACTGGTAGTTTAAAAACTGAGCTGGCATAATGCACGACACATCACGAAGTGCGCACTTATACAATCTTCACTTCGTTTCGATTGTGTGCGCCCTGCGGGGCTGAAAGAAAACGGCAAAAAGGCATTACGGAAGAA

oriT secondary structure

Predicted by RNAfold.

Relaxase

MobQ4

• ID: 1071
• GenBank: NP_049443
• Name: MobQ4
• UniProt ID: Q9X3Z7
• Length: 482 a.a.

Relaxase protein sequence

• Length: 482 a.a.
• Molecular weight: 56740.64 Da
• Isoelectric Point: 9.7839

>NP_049443.1 Mob (plasmid) [Bacillus subtilis]
MANYAVIRMEKYKKDRLNGTQKHNQREFQKSKNENIDRERTHLNYDLVNEKPISYSKAVHEKIEGRVKRK
VRADAVLVSEFLITASPDYMNGMSEKEQRRYFETAVDHLKEKYSAENMLYATVHMDEATPHMHVGIVPIT
EDGRLSAKDFFNGKLKMKAIQDDFHRHMVENGFDLVRGEPSEKKHENVHQYKINQRKAELERLNAEIALK
EKQREELEKQNKAVQAVIEVKKESLTVKAEELKMPTIEHEKAWLKKDKVIVPERELHALYAYAEQKTKTA
AELAGQLKSETKEKERWQSIARQEADRADEKDQRLQELQSRIHSEVEASKKEMRRKLAKEFTEEQRQDLR
QEVKEELTTLRTENEELSAENKVLIIQRNSEAAESLKLKQELDKRNGQYAEVLSFAKKQNQTLEKVVGEN
KVLKKENKTLKERVAVLEQWKDKMVQWAKEKLPKMRKLAASFFRTAGMPREANKYKDNELER

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (1-192)

Protein structure

• AlphaFold DB: Q9X3Z7

Host bacterium

• ID: 1457
• GenBank: _
• Plasmid name: pMOB_Q4
• Incompatibility group: -
• Coordinate of oriT [Strand]: _

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -