oriTDB
I. Information of Relaxase
ID 92
Name TrwC_pHH2-227 insolico
GenBank accession number AEY63615
Family MOBF
Length 966 aa
UniProt ID H2DDW0
PDB ID _
Pfam TrwC [PF08751.10], Evalue: 1.20E-83, Aligned region: 12..288
AAA_30 [PF13604.5], Evalue: 1.30E-45, Aligned region: 472..659
Viral_helicase1 [PF01443.17], Evalue: 2.50E-06, Aligned region: 492..697
UvrD_C_2 [PF13538.5], Evalue: 3.90E-07, Aligned region: 847..894
AAA_19 [PF13245.5], Evalue: 8.60E-06, Aligned region: 477..601
Note conjugative relaxase
Protein sequence [Download] MLSHMVLTRQDIGRAASYYEDGADDYYAKDGDASEWQGKGAEELGLSGEVDSKRFRELLA
GNIGEGHRIMRSATRQDSKERIGLDLTFSAPKSVSLQALVAGDAEIIKAHDRAVARTLEQ
AEARAQARQKIQGKTRIETTGNLVIGKFRHETSRERDPQLHTHAVILNMTKRSDGQWRAL
KNDEIVKATRYLGAVYNAELAHELQKLGYQLRYGKDGNFDLAHIDRQQIEGFSKRTEQIA
EWYAARGLDPNSVSLEQKQAAKVLSRAKKTSVDREALRAEWQATAKELGIDFSRREWSGR
EKGGSEKQAHSFMPSDEAAKRAVRYAINHLTERQSVMDERELVDTAMKHAVGAARLEDIQ
KELLRQTETGYLIREAPRYRPGGQTGPTDEPGKTRAEWIAELAAKGMKQGAARERVDNAI
KTGGLVPIEPRYTTQTALEREKRILQIERDGRGAVAPVIAAEAARERLASTNLNQGQREA
AELIVSAANRVVGVQGFAGTGKSHMLDTAKQMIEGEGYHVRALAPYGSQVKALRELNVEA
NTLASFLRAKDKNIDSRTVLVIDEAGVVPTRLMEQTLKLAEKAGARVVLMGDTAQTKAIE
AGRPFDQLQAAGMQTAHMREIQRQKNPELKIAVELAAAGKASSSLERIKDVTEIKNHHER
RAAVAEAYIALKPDERDRTLIVSGTNEARREINQIVREGLGTAGKGIEFDTLVRVDTTQA
ERRHSKNYQVGHVIQPERDYAKTGLQRGELYRVVETGPGNRLTVIGEHDGQRIQFSPMTH
TKISVYQPERAELAVGDTIRITRNDKHLDLANGDRMKVVAVEDRKVTVTDGKRNVELPTD
KPLHVDHAYATTVHSSQGLTSDRVLIDAHAESRTTAKDVYYVAISRARFEARVFTNDRGK
LPAAIARENIKSAAHDLARDRGGRSAAAERQREQQREAERNRQTQQPAHDRQKAAREAER
GMEAGR
Reference
[1] Król JE et al (2013) Invasion of E. coli biofilms by antibiotic resistance plasmids. Plasmid. 70(1):110-9. [PMID:23558148]

II. Auxiliary DNA-binding protein(s) of the relaxosome
# ID Name GenBank Length Note
1 133 TrwA_pHH2-227 insolico AEY63617 121 aa relaxosome accessory protein TrwA

Microbial Bioinformatics Group in MML, SJTU