 ID | 88 |
| Name | TraA_pRiA4b  |
| GenBank accession number | BAB47249 |
| Family | MOBQ |
| Length | 1108 aa |
| UniProt ID | Q93UY4 |
| PDB ID | _ |
| Pfam | MobA_MobL [PF03389.14], Evalue: 3.40E-77, Aligned region: 17..243 AAA_30 [PF13604.5], Evalue: 4.00E-58, Aligned region: 386..573 AAA_19 [PF13245.5], Evalue: 1.20E-11, Aligned region: 391..518 Viral_helicase1 [PF01443.17], Evalue: 9.30E-05, Aligned region: 666..742 UvrD_C_2 [PF13538.5], Evalue: 1.50E-06, Aligned region: 697..741 |
| Note | relaxase |
| Protein sequence [Download] | MAVPHFSVSVVARGSGRSAVLSAAYRHCAKMEFEREARTIDYTRKQGLLHEEFVIPADAP EWVRSMIADRSVAGASEAFWNKVEAFEKRSDAQLAKDVTIALPIELTAEQNIALMRDFVE RHITSKGMVADWVYHDAPGNPHVHLMTTLRPLTEDGFGSKKVAVLGPDGKPIRNDAGKIV YDLWAGSTEEFNAFRDGWFACQNKHLALAGLDIRIDGRSFEKQGIDLEPTIHLGVGAKAI ERKAEQSDHKSETSTPKLERIELQEERRSENARRIQRRPEIVLELITREKSVFDERDVAK VLYRYIDDVALFQSLMVRILQSPVALRLERERIDFATGIRTPAKYTTREMIRLEAEMANR AIWLSGRASHGVREAVLEATFARHVRLSDEQRTAIEHVADGERIAAIIGRAGAGKTTMMK AAREAWEAAGYRVVGGALAGKAAEGLEKEAGIQSRTLSSWELRWNQGRNQLDDKTIIVLD EAGMVSSRQMALLVETVTRAGAKLVLVGDPEQLQPIEAGAAFRAIADRIGYAELETIYRQ RQQWMRDASLDLARGNVRKAVDAYTAHGRMIGLRLKDEAVESLIAAWDRDYDPSKTSLIL AHLRRDVRMLNEMARAKLVERGIVANGFAFKTEDGTRMFAAGDQIVFLKNEGSLGVKNGM LAKVLEAALGRIVAEIGEGEHRRKVTIEQRFYNNLDHGYATTIHKSQGATVDRVKVLASL SLDRHLTYVAMTRHREDLAVYYGSRSFAKSGDLVPILSRRNAKETTLDYEKASFYGQALR FADTRGLHLMDVARTVARDRLEWTIRQSSRLVDLGVRLAAIATKLGFVGSFKNSPIQNPI KEAKPMVSGITTFPKSLEQAVEDKLAADPGLKKQWEDVSTRFHLVYAQPEAAFKAINVDT MLKDQSVAQSTLARIAGEPESFGALKGKTGVLASRADRQDREKAIANVPALARNLERYLR ERAEAEFKHETEERAVRLKVSVDIPALSPSAKQTLERVRDAIDRNDLPAGLEYALADKMV KAELEGFAKAVSERFGERTFLPLAAKDTDGKTFETATAGMTAGQKAEVQSAWNSMRTVQQ LAAHERTTEALKQAETLRQTKSQGLSLK |
Reference| [1] Wetzel ME et al (2015) The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups. Genome Biol Evol. 7(12):3337-57. [PMID:26590210] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 127 | TraC_pRiA4b | BAB47248 | 97 aa | conjugal transfer protein TraC |
| 2 | 128 | TraD_pRiA4b | BAB47247 | 71 aa | conjugal transfer protein TraD |