oriTDB
I. Information of Relaxase
ID 39
Name TraI _pBS228 insolico
GenBank accession number YP_758719
Family MOBP
Length 732 aa
UniProt ID Q0E689
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 7.90E-67, Aligned region: 12..252
Note conjugal transfer relaxase TraI
Protein sequence [Download] MIAKHVPMRSIKKSDFAELVKYITDEQGKTERLGHVRVTNCEANTLPAVMAEVMATQHGN
TRSEADKTYHLLVSFRAGEKPDAETLRAIEDRICAGLGFAEHQRVSAVHHDTDNLHIHIA
INKIHPTRNTIHEPYRAYRALADLCATLERDYGLERDNHETRQRVSENRANDMERHAGVE
SLVGWIKRECLPELQAAQSWEDLHRVLRENGLKLRERGNGFIFEAGDGTTVKASTVSRDL
SKPKLEARFGAFTPAEGGEAPRRREYRAKPLKTRIDTTELYARYQSERQEMGAVRKGELD
TLRRRRDRLIEAAMRSNRLRRAAIKLLGEGRIAKRLMYAQAHKALRADLDKINREYRQGR
QAVQERTQRRAWADWLKAEAMKGDDKALAALRAREGRSDLKGNTIQGSGEAKPGHAAVTD
NITKKGTIIYRVGSSAVRDDGDRLQVSREATTDGLDAALRLAMERFGDRITVNGTAEFKE
RIAQAAAAGRLAITFDDAALERRRQELLTKEQAHEQPERNDGRRDRGGDGGIRPAAARTT
LNATGGDGDRRDARAVSAGGTVALRKPNVGRIGRKPPPQSQNRLRALSQLGVVRIAGGAE
MLLPRDVPGHVEQQGAEPAHALRRGVSGPGRGLKPEQIAAAEKYVAEREQKRLNGFDIPK
HARYTDYVGALSYAGTRNVEDQALALLRKENDEILVLPVDKATVQRMKRLAIGDPVTVTP
RGSLKTTRGRSR
Reference
[1] Haines AS et al (2007) Sequence of plasmid pBS228 and reconstruction of the IncP-1alpha phylogeny. Plasmid. 58(1):76-83. [PMID:17320955]

II. Auxiliary DNA-binding protein(s) of the relaxosome
# ID Name GenBank Length Note
1 63 TraH_pBS228 insolico YP_758720 119 aa relaxosome stabilisation
2 64 TraJ_pBS228 insolico YP_758722 123 aa conjugal transfer relaxosome component TraJ
3 65 TraK_pBS228 insolico YP_758723 134 aa TraK oriT binding protein

Microbial Bioinformatics Group in MML, SJTU