 ID | 35 |
| Name | TraI_pEST4011  |
| GenBank accession number | NP_990929 |
| Family | MOBP |
| Length | 730 aa |
| UniProt ID | Q6QHL4 |
| PDB ID | _ |
| Pfam | Relaxase [PF03432.13], Evalue: 1.70E-54, Aligned region: 12..252 |
| Note | relaxase |
| Protein sequence [Download] | MIAKHVSMKTVQKSDFAGLVKYITDEQAKNERVGYVAVTNCHTDRPEVAITEVLNTQAQN TRSGADKTYHLIVSFRPGEQPDDATLKAIEARICEGLGFGEHQRVSAVHHDTDNLHIHIA INKIHPTRYTILEPFNAYHTLGQLCEKLEREYSLERDNHQGNKLVSEGRAQDMERHASVE SLQGWVKRECAADMQAAQSWDALHQVMRDNGLELRERGNGFVIQAADGLDVKASSIGREF SKAKLEERLGTFEPSAEHLERAAQKPRKQYDKKPVRSRVNTVELHAKYKADQLTISGSRT AEWEKARAKKDRLIEAAKRSGRLKRSTIKLISGAGVGKKLMYSATSKTMKSEIEKINKQY LKERQEIHEKYQRRAWADWLRAKAAEGDQEALGALRARDAAQGLKGNTVAGTGPLRPQAA AAEQDSVTKKGTIIYRVGPTAVRDDGDRLKVSRGADQDGMQAALRMAMDRYGDRISVGGT PAFKEQIAQAAAASKLPITFDDDALERRRQELLTQATTKENDHDRTDRGRAAGGGISGSG PAIAAIPGAARAGQPRAAAAGRTTKPNVGRVGRKPPPQSQNRLRRLSQLGVVQLASGSEV LLPRHVPGDVEQQGAKPVDGLRRDIFGPGRLSPQVAAAADKYIAEREGKRLKGFDIPKHS RYTDGQDGAATFAGIRQVEGQSLALLTRGEEVMVLPVDEPTARRLKRLAVGDAITVTPQG SIKTTKGRSR |
Reference| [1] Vedler E et al (2004) The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation. J Bacteriol. 186(21):7161-74. [PMID:15489427] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 53 | TraH_pEST4011 | NP_990930 | 108 aa | relaxosome stabilization |
| 2 | 54 | TraJ_pEST4011 | NP_990932 | 129 aa | oriT recognizing protein; required for relaxase activity |
| 3 | 55 | TraK_pEST4011 | NP_990933 | 132 aa | oriT-binding protein; constitutes a part of relaxosome, necessary for nicking at oriT |