oriTDB

I. Information of Relaxase

ID	204
Name	LtrB_pRS01
GenBank accession number	AAB06502
Family	MOB_P
Length	563 aa
UniProt ID	Q48722
PDB ID	_
Pfam	Relaxase [PF03432.13], Evalue: 7.50E-82, Aligned region: 34..307
Note	relaxase
Protein sequence [Download]	MVYTKHIIVHKLKHLRQAKDYVENAEKTLVNESNEDHLTNLFPYISNPDKTMSKQLVSGH GITNVYDAANEFIATKKLKALSKGTDFNFDPQTGKVRFNVESLEKNNAVLGHHLIQSFSP DDNLTPEQIHEIGRQTILEFTGGEYEFVIATHVDREHIHNHIIFNSTNLYTGKQFDWKVI PKEKTKSGKAYDVTKNNFEKVSDKIASRYGAKIIEKSPGNSHLKYTKWQTQSIYKSQIKQ RLDYLLEMSSDIEDFKRKATALNLSFDFSGKWTTYRLLDEPQMKNTRGRNLDKNRPEKYN LESIIERLETNELSLTVDEVVERYEEKVDVVKQDFDYQVTVEKGQIDHMTSKGFYLNVDF GIADRGQIFIGGYKVDQLENRDCVLYLKKNETFRLLSEKEASFTKYLTGHDLAKQLGLYN GTVPLKKEPVISTINQLVDAINFLAEHGVTEGTQFNNMESQLMSALGEAEEKLYVIDNKI MELTKIAKLLIEKESDHSQAVINELENLGVGPSIKYQDIHQELQSEKMSRKILKNKFEQT VDEINTFNEIRVTTLEENKGKIL

Reference

[1] Novikova O et al (2014) Interaction between conjugative and retrotransposable elements in horizontal gene transfer. PLoS Genet. 10(12):e1004853. [PMID:25474706]

[2] Mills DA et al (1996) Splicing of a group II intron involved in the conjugative transfer of pRS01 in lactococci. J Bacteriol. 178(12):3531-8. [PMID:8655550]

II. Auxiliary DNA-binding protein(s) of the relaxosome

#	ID	Name	GenBank	Length	Note
1	286	_