oriTDB
I. Information of Relaxase
ID 156
Name TraC_pWW0 insolico
GenBank accession number NP_542915
Family MOBF
Length 978 aa
UniProt ID Q8VMG1
PDB ID _
Pfam TrwC [PF08751.10], Evalue: 3.50E-81, Aligned region: 8..287
AAA_30 [PF13604.5], Evalue: 5.10E-42, Aligned region: 473..673
Viral_helicase1 [PF01443.17], Evalue: 2.20E-05, Aligned region: 822..915
AAA_19 [PF13245.5], Evalue: 1.90E-06, Aligned region: 478..614
UvrD_C_2 [PF13538.5], Evalue: 5.80E-07, Aligned region: 867..914
Note relaxase
Protein sequence [Download] MFNVTLIKGDNQYAAAGYFSNADDYYAKEAPGEWQGIGAELLGLEGAIDQKELARLFDGK
LPNGERMAKTFDKETGTRRMGLDLTFSAPKSVSMQALIAGDKDVMAAHDRAVTKSMEEVE
RLAQTRLKVNGKTMLERSGNLVIGKFRHEMSRAKDPQMHTHAVVMNMTRRSDGKWRALRN
DDIYKIQPQVDAMYKGILAQELRALGYEIRVLDNQGNFELAHISRDQIEAFSSRSKVIED
ALAKDGKTRADATPLEKQIIAMATRPRKDERDRHLVKEYWVTKARELGIDFGARSHLDNR
EYAPRNGGPAEYSLPQGITPGQAVVQYAINHLTEREQVVGENDLRTVALRRAVGLATPDQ
VNDEIRRLVKQGTLIESPPTYRMPNGDLDSPVLSPAGWRAHLQELKGWSEKEARQYVDKA
IKRGSLEPAEKRYTTQKALKREKAILAIERTGRGQVTPLMTKEQVAKALEGSTLSPGQFQ
AVEVIVSTNNRFVGIQGDAGTGKTYSVDRAVKLIDSVNAAMATNNPQDITGYRVVALAPY
GNQVTALKNEGLDAHTLASFFHTKNKGLDAKTIVILDEAGVVGARQMERLMREIEQSGAR
LIQLGDTKQTEAIEAGKPFAQLQQSGMQTARIKEIQRQKDPELKRAVQHAAEGQPTKSLE
HLKHVEELRTASDRHQAIVRDYMALTPDQRKEVLIVAGTNKDRKEINTMARQALGLFGKG
KEFETLNRVDSTDAERRYAPSYKQGMIIQPEKDYKRAGLVRGELYVVDQALPGNVLVVKD
RSGNRFEFNPRQATKLSVYKLEKPELAVGDLIRINRQDPKLDLTNGDRMRVVSIEGGVVQ
LASLKEVNGQPERTVSLPTNKPLHLEHAYSATVHSAQGLTNDRVMISLNTKSRTTSQNLW
YVAISRARHEARVYADSIKGLPAAIAKRYDKTTALSLQQERERQRRDSIQPRTVSDGRAL
ERKQRTGLDGPSSGNARI
Reference
[1] Greated A et al (2002) Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas putida. Environ Microbiol. 4(12):856-71. [PMID:12534468]

II. Auxiliary DNA-binding protein(s) of the relaxosome
# ID Name GenBank Length Note
1 226 TraA_pWW0 insolico NP_542913 127 aa putative TraA protein