oriTDB
I. Information of Relaxase
ID 111
Name MobA_pSC101 experimental
GenBank accession number NP_044284
Family MOBQ
Length 371 aa
UniProt ID P14492
PDB ID _
Pfam MobA_MobL [PF03389.14], Evalue: 1.10E-30, Aligned region: 17..224
Note relaxase
Protein sequence [Download] MASYHLSVKTGGKGSASPHADYIAREGKYAREKDSDLEHKESGNMPAWAAHKPSEFWKAA
DTSERANGCTYREIEIALPRELKPEQRLELVRDFVQQEIGDRHAYQFAIHNPKAAIAGGE
QPHAHIMFSERINDGIHRDPEQYFKRANTKEPDAVAQKRHVSGKHRPNAKNTLLPRGRRW
ADLQNKHLERYQHADRVDSRSLKAQGIDREPERHLGAGQVQRFDTEQLQAILERREAERQ
VQQSRDERDSVIDVTTSLREALSERDTLTLKQELKSEPEQESHSGRTFDFEKEPDKLNAL
VSDAMKDIQEEIDLQSLVNDAMAEFQGIHQEMERQRERERLAEKQRQQEKERQRLAEQIR
QKPDKGWSFSR
Reference
[1] Meyer R (2000) Identification of the mob genes of plasmid pSC101 and characterization of a hybrid pSC101-R1162 system for conjugal mobilization. J Bacteriol. 182(17):4875-81. [PMID:10940031]
[2] Jandle S et al (2006) Stringent and relaxed recognition of oriT by related systems for plasmid mobilization: implications for horizontal gene transfer. J Bacteriol. 188(2):499-506. [PMID:16385040]
[3] Becker EC et al (2012) Origin and fate of the 3' ends of single-stranded DNA generated by conjugal transfer of plasmid R1162. J Bacteriol. 194(19):5368-76. [PMID:22865840]

II. Auxiliary DNA-binding protein(s) of the relaxosome
# ID Name GenBank Length Note
1 167 MobX_pSC101 insolico NP_044283 194 aa

Microbial Bioinformatics Group in MML, SJTU