 ID | 105 |
| Name | TraI_QKH54  |
| GenBank accession number | CAJ43356 |
| Family | MOBP |
| Length | 802 aa |
| UniProt ID | Q1H9W9 |
| PDB ID | _ |
| Pfam | Relaxase [PF03432.13], Evalue: 2.00E-50, Aligned region: 12..252 |
| Note | TraI DNA relaxase |
| Protein sequence [Download] | MIAKRIPMNSAKKSSFAGLVKYITSSQGINERVGQVRVTNCQTEELSWAVHEVLHTQKIN TRAEGDKTYHLLISLAPGEQPSSEVLRDIEDRVCSAIGYQDHQRVSAVHNDTDCLHIHIA INKIHPERHTLHEPYRDFKTLGDICARLELEHGLQQVNHARKKSVSEGRANDMEQHAGIE SLITWVRRECLEQVQGAKNWTELHQVLHENGLELRERGNGLVITDQAGTMVKASTVARDL SKGKLEERLGAFENQQQQARASHNQGKPLPRKPGIGRVGRRPPPASKNRLRGLSTLQAIQ IDSGKRYEKSPVKHKSDTTELYARFRDEQNAVRHTKAKELAAARERRDRAIEQAKNVAKL KRSSIKLMATPGLTKKLLYASTHKSLQEQITSLRAEHIKAIENINTLNKARQWADWLQAK ALDGDQDALKALRARQGVKGLQGDAVAAKGQQHSAKAVPIEQDHITKEGTVIYRAGTSAI RDDGSKLQLSRGANFDGIETALRMAAARYGEKITITGSDQFKELVAQTAAIRSLPIKFDD PALEQRRQSLQQAIEKERNNVGRTDRGRAAGSGAGVDGLHAARGGRGIGAGGTTGAGRGT GVRGSTAGTQLSGRAGTAASGRITVRAPGGTPKPGVARVGRKPPPESQNRLRALSKLGVV QLTQGSEVLLPRDVPGVVEHQGAKPDNGLRRDVSRSGGIAAEGKTISSAQAARQYVAERE DKRAKGFDIPKHRLYNQADDGPATFEGLRQVEGQSMALLKRGDELLVLPVNEATARRMKR MKLGDPVTANATGAIKSKGRSR |
Reference| [1] Haines AS et al (2006) Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype. Microbiology. 152(Pt 9):2689-701. [PMID:16946264] |
| [2] Pachulec E et al (2010) Conjugative Plasmids of Neisseria gonorrhoeae. PLoS One. 5(4):e9962. [PMID:20376355] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 157 | TraJ_QKH54 | CAJ43359 | 118 aa | TraJ oriT-binding protein |
| 2 | 158 | TraK_QKH54 | CAJ43360 | 142 aa | TraK oriT-binding protein |
| 3 | 159 | TraH_QKH54 | CAJ43357 | 139 aa | TraH relaxosome stabilising protein |