oriTDB
The information of the oriT region
oriTDB accession number 200076
Name oriT_SXT(KN14)  insolico
Sequence Completeness intact
oriT length 299 nt
oriT sequence GCTCTGTTTGGCGGCTGGTGACCTAGCCAAAAAAATTGAGACGCCAAACGTCGTTTGCAT TCTGGCCTGAACTTGCCAAACGGTTTGTATCTTCATGGCGATACGTCTTTTTAGGTGTTT TTAAGTGAAATCAGCCTGTATCCCTTGTCGGGTATGGGATTGAGCGAGTCGATTTATATC GAGACGCCAAACAGTGATTGTGACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGCCA AACGGATAGTGGTTTTGGCTTTAGGGGTTAATTGGATGGGGAAATTGGTTTGGTAGAAA
IR (inverted repeat)[178-192] [216-230] nt  (ATCGAGACGCCAAAC..GTTTGGCGTTTCGAT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note _
L:178-192;R:216-230
Visualization of oriT structure
Reference
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Information of mobile element
ID 84
Element type _
ICE description SXT(KN14)
ICEberg accesion number 273
GenBank accession number AB535680.1
Family SXT/R391
Genome size _
Coordinate of oriT  [+/-] 2684..2982 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Vibrio cholerae O1 biovar El Tor [686]
Reference
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Microbial Bioinformatics Group in MML, SJTU