oriTDB
The information of the oriT region
oriTDB accession number 200074
Name oriT_ICEPmiJpn1  insolico
Sequence Completeness intact
oriT length 299 nt
oriT sequence GCTCTGTTTGGCGGTGGATGACTGAGCCAAAAAAATCGAGACGCCAAACGTCGTTTGCAT TCTGGCCTGAACTCGCCAAACGGTTTGTATCTTCATGGCGATACGTCTTTTCAGGCATTT ATATGTGAAATCGGGCTGTATCCCTTGTCAGGTATGGGATTGCGCGAGTTGATTTATATC GAGACGCCAAACAGTGATTGTTACGGCAGTTTTACGTTTGGCGTTTCGATCCAAAAGCCA AACGGATAGTAGTTTTGGCTTTTGGGGTTAATTGGATGGGGAAATTGGTTTGGTAGAAA
IR (inverted repeat)[178-192] [216-230] nt  (ATCGAGACGCCAAAC..GTTTGGCGTTTCGAT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note _
L:178-192;R:216-230
Visualization of oriT structure
Reference
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Information of mobile element
ID 82
Element type _
ICE description ICEPmiJpn1
ICEberg accesion number 41
GenBank accession number AB525688.1
Family SXT/R391
Genome size _
Coordinate of oriT  [+/-] 5674..5972 [+]
Drug resistance insolico Antibiotic resistance genes: blaCMY-2
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Proteus mirabilis TUM4660 [584]
Reference
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Microbial Bioinformatics Group in MML, SJTU