oriTDB
The information of the oriT region
oriTDB accession number 200071
Name oriT_ICEVchMoz6  insolico
Sequence Completeness intact
oriT length 282 nt
oriT sequence GTGCTGTTTGGCTGTGTTCGCCAAGTGCAAAAAAATCGAGACGCCAAACGATCGTTTGCA TTCTGGATTTAAAAAATCAAACGGTTTGTACTTTGATGCCGAGGTTGGTTTAGGGGGCAA AAAGTGCCAAACCTTGCTTTGAGCCAGTACTGGCAAGGCCTACCAGCGTTGGATTTCAAT CGAGACGCCAAACAGTAAATGGGCTAATTTCCCTGTTTGGCGTTTCGATCCAAAAGCCAA ACGGATAGTGGTTTTGGCGTAAGGGGGTAAAGGCATGGGGAA
IR (inverted repeat)[179-195] [213-229] nt  (ATCGAGACGCCAAACAG..CTGTTTGGCGTTTCGAT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note _
L:179-195;R:213-229
Visualization of oriT structure
Reference
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Information of mobile element
ID 79
Element type _
ICE description ICEVchMoz6
ICEberg accesion number 29
GenBank accession number GU930744.1
Family SXT/R391
Genome size _
Coordinate of oriT  [+/-] 1..282 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Vibrio cholerae 16AMOZ [666]
Reference
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Microbial Bioinformatics Group in MML, SJTU