oriTDB
The information of the oriT region
oriTDB accession number 200070
Name oriT_ICEVchMoz2  insolico
Sequence Completeness intact
oriT length 280 nt
oriT sequence GTGCTGTTTGGCTGTGTTCGCCAAGTGCAAAAAAATCGAGACGCCAAACGATCGTTTGCA TTCTGGATTTAAAAAATCAAACGGTTTGTACTTTGATGCCGAGGTTGGTATAGGGTACAA AAAGTGCCAAACCTTGCTTTGAACCAGTAATGGCAAGGCCTACCAGCGTTGGATTTCAAT CGAGAAGCCAAACAGTGAATGGGCTAATTTCCCTGTTTGGCGTTTCGATCCAAAAGCCAA ACGGATAGTGGTTTTGGCGTATGGGTAAAGGCATGGGGAA
IR (inverted repeat)[179-193] [215-229] nt  (ATCGAGAAGCCAAAC..GTTTGGCGTTTCGAT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note _
L:179-193;R:215-229
Visualization of oriT structure
Reference
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Information of mobile element
ID 78
Element type _
ICE description ICEVchMoz2
ICEberg accesion number 25
GenBank accession number GU930741.1
Family SXT/R391
Genome size _
Coordinate of oriT  [+/-] 1..280 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Vibrio cholerae 3AMOZ [666]
Reference
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Microbial Bioinformatics Group in MML, SJTU