 oriTDB accession number | 200043 |
| Name | oriT_Tn6085b  |
Sequence Completeness  | intact |
| oriT length | 215 nt |
| oriT sequence | AAGCGGAAGTCGCAGGTGTGGACTGATCTTGCTGGCTGGTGTGGCAATAGCCACGCCAGC ACTTAACCCCCCGTATCTAACAGGGGGGTACAAATCGACAGGAAACAGTCAAAAAAACAT TAGAAAATCCTTTGGTTACAAGGGATTTACAAAATTTCAGCGTATGTCAAATGGGCTTTA AAAGTTGACATACGCCTTTTTGATTGGAGGGATTT |
| IR (inverted repeat) | [61-76] [80-95] nt (ACTTAACCCCCCGTAT..ACAGGGGGGTACAAAT) [123-134] [139-150] nt (GAAAATCCTTTG..CAAGGGATTTAC) |
| Location of nic site | [135-136] nt |
| Conserved sequence flanking the nic site | TGG|T |
| Note | blastn alignment with the oriT_Tn916 |
Visualization of oriT structure Reference| ID | 48 |
| Element type | Tn916-like |
| ICE description | Tn6085b |
| ICEberg accesion number | 318 |
| GenBank accession number | HM243623.1 |
| Family | Tn916 |
| Genome size | 20790 bp |
| Coordinate of oriT [+/-] | 15021..15235 [+] |
| Drug resistance | resistance to tetracycline and minocycline |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Enterococcus faecium C68 [565664] |
Reference| [1] Rice LB et al (2010) Multiple copies of functional, Tet(M)-encoding Tn916-like elements in a clinical Enterococcus faecium isolate. Plasmid. 64(3):150-5. [PMID:20600284] |