oriTDB

The information of the oriT region

oriTDB accession number	100952
Name	oriT_pWSM1497
Sequence Completeness	core
oriT length	34 nt
oriT sequence	GAGGGAGGGCGCGCTTATACGTCGTGCCGACGTG
IR (inverted repeat)	[19-24] [28-33] nt (ACGTCG..CGACGT)
Location of nic site	_
Conserved sequence flanking the nic site	_
Note	predicted by the oriTfinder
	L:19-24;R:28-33

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GAGGGAGGGCGCGCTTATACGTCGTGCCGACGTG

Reference
N/A

I. Information of Relaxase

ID	1022
Name	TraA_pWSM1497
GenBank accession number	WP_064994117
Family	MOB_Q
Length	1015 aa
UniProt ID	A0A1W6XHL5
PDB ID	_
Pfam	MobA_MobL [PF03389.14], Evalue: 5.10E-69, Aligned region: 17..217 AAA_30 [PF13604.5], Evalue: 9.50E-57, Aligned region: 351..540 AAA_19 [PF13245.5], Evalue: 2.50E-07, Aligned region: 356..483
Note	putative relaxase
Protein sequence [Download]	MAIYHLHVKVIGRKAGSSAVASAAYRSASRLRAERIDRTHNFSAKRGVVHSEVMLPENAP EAWRDRERLWNDVEAFEVRKDAQLAREVEFALPRELSQAQGIELARDFVEAEFVSRGMVA DLNVHWDRAEDGSPKPHAHVILTMRAVDANGFGSKVRDWNATQLVERWRERWAELANERL AELDIDARIDHRSLEAQGIALEPQTQIGAPAQRIEGSGLAAGDSEADRAELHREIARNNG ARIIADPSVALDAITHQQSTFTRKDIAKFSHRHSDGMEQFNEVVVAISNAPDLVELGKDG RGEDRFTTRQMIETEQRLHRAAERIDLDERHAVSDAHREAALARAAQRGLILSEEQSDAL AHITDGRGLGVVVGFAGTGKSAMLGVARQAWAAAGYEVRGAALSGIAAENLESGSGIPSR TIASMEHGWGQGRDLLTARDVLVIDEAGMVGTRQLERVLSHAADAGAKVVLVGDPQQLQA IEAGAAFRSIHERHGGVEIGQVRRQSEDWQRDATRDLATGRIGAAISAYDAQGMVHHAAT RDAARSELVERWDRDRQAHPEASRIILTHTNDEVRALNQAARERMRAAGDLGEDVQVNVE RGPRNFASGDRVMFLRNERGLGVKNGTLGIVEEVSTQSIAVRTDDDRSVRFDLKDYAHID HGYAATIHKAQGMTVARTHVLATPGMDAHGSYVALSRHRDRMELHYGGDDFANRERLVRT LSRNRAKDMASDYEQIDPAQSYAERRGITFRERVVEIVRRIVPEKLRDRIGEFLDGLRSP ADAEPGNDRGRGPERENVGALSADGGAAPERDVSVRGAQRDTDAAVSPEAALRRARTNAL VRHARAIDAILSSGNVDGQGSPEQMRELRDARSAFEKVRPHGWRDAEAAYVKNPELLREA GAGRVNRIVLALQLETEIRTGLDSDPAGRAERFVEHWQKLHRTSQDQYQAGDMSGYKSTR LAMSNMAKSLERDPQLESLLANRKRELGINVESGRRFGAELAFNHGIGRGRGIGI

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1410
Plasmid name	pWSM1497
GenBank accession number	NZ_CP021071.1
Genome size	531629 bp
Coordinate of oriT [Strand]	273432..273465 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Mesorhizobium sp. WSM1497 [278153]

Reference
N/A