oriTDB

The information of the oriT region

oriTDB accession number	100945
Name	oriT_pFDAARGOS_205-2
Sequence Completeness	incomplete
oriT length	55 nt
oriT sequence	GTAATGCCCACTTATCAGTTTCTCTTCGAGAAACTGGTGGGCAAGCGTACCGCTT
IR (inverted repeat)	IR1: [16-24] [28-36] nt (CAGTTTCTC..GAGAAACTG) IR2: [43-47] [51-55] nt (AAGCG..CGCTT)
Location of nic site	_
Conserved sequence flanking the nic site	_
Note	predicted by the oriTfinder
	L:16-24;R:28-36;L:43-47;R:51-55

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GTAATGCCCACTTATCAGTTTCTCTTCGAGAAACTGGTGGGCAAGCGTACCGCTT

Reference
N/A

I. Information of Relaxase

ID	1015
Name	Mob_pFDAARGOS_205-2
GenBank accession number	WP_032490546
Family	MOB_Q
Length	478 aa
UniProt ID	Q84AT6
PDB ID	_
Pfam	MobA_MobL [PF03389.14], Evalue: 2.40E-28, Aligned region: 9..222
Note	putative relaxase
Protein sequence [Download]	MAIYHLNVRYCSKSKGQSAQAKNDYINRNDKYSKRLDDLQFSGYGNMPKFAEDNPQEFWR LSDIYERANARVCTEIEFALPRELTLEQQQKLVSSFIENTVDSGSNKLPYSFAIHTDKNN HNPHCHLIFSERQLDGIDRTAEQFFKRANTKSPEKGGAMKTADFRDREFIQSVRKTWREQ ANQALEQYGYAARIDERSYKEQGIEQAPRARIDRVTWQELNRLEQEERQIVQELALKGQE INKEKSYLQKIEEKQAQGMGKYESKFAAAFSKLSESALKHDLSNEKEKDSKIHTQEEKVP QNRIQGLSQADFDQFLIDEWLPQIEKYVKAQEKRDGMEVEITQYDKDLQRIQGDYNKLTD KNQGFLGLWETKEQKAKKKELEDEYKHTAEQRNAKSQELAEYSQKIKAYEQKTLEPINEK IAKYQADNPEIKMRSLGFVKKIKAQGAYKAAQERMEREKQHQQEKQQRHLERESGLSL

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1403
Plasmid name	pFDAARGOS_205-2
GenBank accession number	NZ_CP020417.1
Genome size	7450 bp
Coordinate of oriT [Strand]	5770..5824 [+]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Neisseria gonorrhoeae FDAARGOS_205 [485]

Reference
N/A