oriTDB

The information of the oriT region

oriTDB accession number	100940
Name	oriT_pXI1
Sequence Completeness	incomplete
oriT length	42 nt
oriT sequence	TATACCGGCGATTAGCCTATCCTGCAATAGCCCACACCCCCC
IR (inverted repeat)	_
Location of nic site	[24-25] nt
Conserved sequence flanking the nic site	TATCCTG\|C
Note	predicted by the oriTfinder
	D:24-25

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

TATACCGGCGATTAGCCTATCCTGCAATAGCCCACACCCCCC

Reference
N/A

I. Information of Relaxase

ID	1010
Name	Putative relaxase of pXI1
GenBank accession number	WP_079420795
Family	MOB_P
Length	364 aa
UniProt ID	_
PDB ID	_
Pfam	Relaxase [PF03432.13], Evalue: 4.80E-11, Aligned region: 73..296
Note	putative relaxase
Protein sequence [Download]	MSKTVIDGIIKDWGERLHYSPVKGSKGRNIRSGGTTRAAKPSPPSGPATKEKVARTAKKT AEVMVKISGGGKNMKHIKAHMDYISRNGEVEIEDENGDIHQGMEAVRDVRDSWAKGKIGI PYEGEKRKEAFNIVLSMPPGTDRQAVKDAAREFAKQEFGNHQYVFAAHDDEKHPHVHLAV KAVGNDGIRLNPRKGDLQYWREQFAEKLRDQGIEANATPRRARGVVQKAEKQAVRHIDAE FQQGKRQEPARVTRARKQDAEAEVKTGKKRANPAQDNISAARKDTQKAYGQIARALATGE PEDKQIALNIVRLVQTMPPVVTKHDALVQSLRGTGGQTAERETEPKQPQRQEQGRANPGD EQTR

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1398
Plasmid name	pXI1
GenBank accession number	NZ_CP020047.1
Genome size	42402 bp
Coordinate of oriT [Strand]	29401..29442 [+]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Thiomonas intermedia ATCC 15466 [926]

Reference
N/A