oriTDB
The information of the oriT region
oriTDB accession number 100940
Name oriT_pXI1  insolico
Sequence Completeness incomplete
oriT length 42 nt
oriT sequence TATACCGGCGATTAGCCTATCCTGCAATAGCCCACACCCCCC
IR (inverted repeat)_
Location of nic site [24-25] nt
Conserved sequence flanking the
  nic site 		TATCCTG|C
Note predicted by the oriTfinder
D:24-25
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 1010
Name Putative relaxase of pXI1 insolico
GenBank accession number WP_079420795
Family MOBP
Length 364 aa
UniProt ID _
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 4.80E-11, Aligned region: 73..296
Note putative relaxase
Protein sequence [Download] MSKTVIDGIIKDWGERLHYSPVKGSKGRNIRSGGTTRAAKPSPPSGPATKEKVARTAKKT
AEVMVKISGGGKNMKHIKAHMDYISRNGEVEIEDENGDIHQGMEAVRDVRDSWAKGKIGI
PYEGEKRKEAFNIVLSMPPGTDRQAVKDAAREFAKQEFGNHQYVFAAHDDEKHPHVHLAV
KAVGNDGIRLNPRKGDLQYWREQFAEKLRDQGIEANATPRRARGVVQKAEKQAVRHIDAE
FQQGKRQEPARVTRARKQDAEAEVKTGKKRANPAQDNISAARKDTQKAYGQIARALATGE
PEDKQIALNIVRLVQTMPPVVTKHDALVQSLRGTGGQTAERETEPKQPQRQEQGRANPGD
EQTR
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1398
Plasmid name pXI1
GenBank accession number NZ_CP020047.1
Genome size 42402 bp
Coordinate of oriT  [Strand] 29401..29442 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Thiomonas intermedia ATCC 15466 [926]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU