oriTDB

The information of the oriT region

oriTDB accession number	100823
Name	oriT_pBSY18_4
Sequence Completeness	core
oriT length	34 nt
oriT sequence	GGGAGGGCGCGCTTATACGTCGTGCCGACGTGCG
IR (inverted repeat)	[17-22] [26-31] nt (ACGTCG..CGACGT)
Location of nic site	_
Conserved sequence flanking the nic site	_
Note	predicted by the oriTfinder
	L:17-22;R:26-31

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GGGAGGGCGCGCTTATACGTCGTGCCGACGTGCG

Reference
N/A

I. Information of Relaxase

ID	895
Name	TraA_pBSY18_4
GenBank accession number	WP_069052069
Family	MOB_Q
Length	978 aa
UniProt ID	A0A1B3NB15
PDB ID	_
Pfam	MobA_MobL [PF03389.14], Evalue: 2.00E-68, Aligned region: 17..221 AAA_30 [PF13604.5], Evalue: 2.60E-53, Aligned region: 351..540 Viral_helicase1 [PF01443.17], Evalue: 0.00022, Aligned region: 615..705 AAA_19 [PF13245.5], Evalue: 5.70E-08, Aligned region: 356..483
Note	putative relaxase
Protein sequence [Download]	MAIYHFSAKAISRAAGSSALAAAAYRAGERLHDDRLGRTHDFTNKAGVVHSEIMLPEGAN EAWSDREKLWNDVEASEVRKDAQLAREIEFALPREMTQQQAIELARDFVKAEFVDRGMIA DLNVHWDIGADGEAKPHAHVMLTMREIVVAEDGSTTFGPKVRDWNRTELLTHWREAWATH ANQRMAELDIDARIDHRSLAAQGIDLEPQSKIGAAASRMAGEGLSPERLAEHADIARSNG EKIIADPNIALNAITHQQATFTTRDLAMFAHRHSADKEQFDAVMSAVKNAPDILALGKDG KGNDRFTSRDMIETEQRLERATIRLEARRSHAVPDRYREVALANAKARGMDLSAEQRGAL EHVTSAKGVSNVIGYAGTGKSAMLGVAREAWVRAGYTVQGAALSGIAAEGLEHGSRIPSR TLASLEHQWGQGRELLTSKHILVIDEAGMLGTRQMERVVSHAQQQGAKVVMVGDPQQLQA IEAGAAFRAAAERHGAVEIASIRRQQIDWQREATRELAIGRTGEALGRYEEAGHVHVAET REAARSQLVDAWDRDRQANPDASRIILTHTNDEVRALNEAVREKVRASGDLGEDVALKVE RGARQFADGDRVMFLKNERSLGVKNGSLGTVESVSSLRMSVKLDDGKAVAFDLKDYAHLD HGYAATIHKAQGMTVDQVKLLATPGMDSHGAYVALSRHRSQVDLHYGKDDFGDRKALTRT LSRERVKDMASDYARQAEKAAEQQPQRETRAGLKVSRSGHLADLLKGASVAQQREPAAET RRKVALPEKVSDKQVFDNAVQRFARVAQDIVAMRDKGLQPLASQRTALDKAGAELNALRP DSFGDLRKAVNRDLSLIPEAVKGRTDRAIQAMEQQSRLRIEAQRVAAANERRADGFVDQW QRQSEQYRALRKSGSAAASDKVRASLVDMAKGLERDPQLESVLAARRPQLGLDAMSTKTL SQDLQKSLGLSRGLGIGM

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1283
Plasmid name	pBSY18_4
GenBank accession number	NZ_CP016461.1
Genome size	39932 bp
Coordinate of oriT [Strand]	27002..27035 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Blastomonas sp. RAC04 [1842535]

Reference
N/A