oriTDB
The information of the oriT region
oriTDB accession number 100774
Name oriT_pFOL01  insolico
Sequence Completeness incomplete
oriT length 58 nt
oriT sequence AATTGATTTATTATGTGAGTAGAAACCCTTAGGGTTTCACGAGCTTAATCAATCAATT
IR (inverted repeat)[1-27] [32-58] nt  (AATTGATTTATTATGTGAGTAGAAACC.. GGGTTTCACGAGCTTAATCAATCAATT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note predicted by the oriTfinder
L:1-27;R:32-58
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 846
Name Relaxase_pFOL01 insolico
GenBank accession number WP_075270664
Family MOBP
Length 390 aa
UniProt ID A0A1L6REE8
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 1.40E-62, Aligned region: 8..248
Note putative relaxase
Protein sequence [Download] MATTHIKRSASASRLVNYAEKRAVLKDGLNLDVDYAKSQFKQVREVYGNQGKTQAYASRI
SFSPKEFDPTNEDDQQKALDIAKEVYQKTYPNQQVALYEHADTGALHIHAVVGAIDLETG
KKMHGNWQEYREKLVHNTDEIVQEHGLAVTQVNPERYEKRSMAEIKMQDRGQPTWKDQIR
QAVDSTMSNQLIHDFQTFRDDLKQKAIDVWERGKDLTYQLTGTNYKARGKKLGTAYEKGA
IYHELERRTRDPRDTQSETRKPDTTRIDSSQSDFERNQELSGYTNSTPEQTANRVDRTAP
TNRTNQPTRQSSLSDDLEQFRKQQQDQQRTISRDAKRRAKTVQRTDNDHQSKDNRRTQTD
KPRTKEQQRYPEDLKRQPKPNRSKDYGPSR
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1234
Plasmid name pFOL01
GenBank accession number NZ_CP014333.1
Genome size 35382 bp
Coordinate of oriT  [Strand] 24918..24975 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Weissella jogaejeotgali FOL01 [1631871]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU