oriTDB

The information of the oriT region

oriTDB accession number	100761
Name	oriT_pATCC_43650
Sequence Completeness	core
oriT length	38 nt
oriT sequence	CTTTATGGAATAAAGTATAGTGTGCTATACTTTACATG
IR (inverted repeat)	[1-8] [9-16] nt (CTTTACGA..TAGTAAAG)
Location of nic site	[25-26] nt
Conserved sequence flanking the nic site	GTG\|CTA
Note	predicted by the oriTfinder
	L:1-8;R:9-16;D:25-26

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

CTTTATGGAATAAAGTATAGTGTGCTATACTTTACATG

Reference
N/A

I. Information of Relaxase

ID	833
Name	Putative relaxase of pATCC_43650
GenBank accession number	WP_082707471
Family	MOB_V
Length	347 aa
UniProt ID	_
PDB ID	_
Pfam	Mob_Pre [PF01076.18], Evalue: 3.40E-66, Aligned region: 1..185
Note	putative relaxase
Protein sequence [Download]	MQKMKSPDLKGMQFHNQRERESRTNPDIDPDREHLNYDLLHQEKIDYNKHVKEIIESQKV SERKTRKDAVLVNELLVTSDRKFFDGLDLAEQKRFFEESYKLFSERYGKQNIAYATVHND EKTPHMHLGVVPMRDGKLQGKNIFNRQELQWMQEEFPKHMQSVGFDVERGIASDRKHIEM SRFKALTLNEEIKTLEKETEVLRNALTASKKVDELQVSKPSLFDRNHVKLPVEDFEALKA RAKATEAIERTIEAHEKRFDEMIDNVIDSDRKLDQEKVKTAQLQKENKELKKENQELQKE NKTLKSQLNVLLEFAKSQLEKFKEWQKERQQEKEKNIARKRDQELER

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1221
Plasmid name	pATCC_43650
GenBank accession number	NZ_CP013660.2
Genome size	13524 bp
Coordinate of oriT [Strand]	8616..8653 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Planococcus kocurii ATCC 43650 [1374]

Reference
N/A