oriTDB

The information of the oriT region

oriTDB accession number	100752
Name	oriT_pCCGM7-A
Sequence Completeness	core
oriT length	57 nt
oriT sequence	GCAGGAAAATGGCGTAGCACATTTTTCCGTATCCTGCCTCTCTAGATTGTAAGGGGA
IR (inverted repeat)	[4-14] [18-28] nt (GGAAAATGGCG..CACATTTTTCC)
Location of nic site	[36-37] nt
Conserved sequence flanking the nic site	TATCCTG\|C
Note	predicted by the oriTfinder
	L:4-14;R:18-28;D:36-37

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GCAGGAAAATGGCGTAGCACATTTTTCCGTATCCTGCCTCTCTAGATTGTAAGGGGA

Reference
N/A

I. Information of Relaxase

ID	824
Name	MobC_pCCGM7-A
GenBank accession number	WP_037382731
Family	Other
Length	133 aa
UniProt ID	A0A1L3L8I3
PDB ID	_
Pfam	MobC [PF05713.10], Evalue: 1.40E-07, Aligned region: 72..121
Note	putative relaxase
Protein sequence [Download]	MDEGKFNALLEPPKKDRTVHVRVTADEHAAIEKAAADAGMTVSSFFRSLNMEGAGVRPIL TRDDRLVMAALLEDMRMIGINLNQVARALNSGRGVHPSELDINLENVQRVQAAVMSELRA LTQRAGYQRRGET

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1212
Plasmid name	pCCGM7-A
GenBank accession number	NZ_CP013052.1
Genome size	405481 bp
Coordinate of oriT [Strand]	80091..80147 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	putrescine degradation
Host bacterium [NCBI Taxonomy ID]	Sinorhizobium americanum CCGM7 [1408224]

Reference
N/A