oriTDB

oriT
Relaxosome
T4CP
Plasmid&Host

The information of the oriT region

oriTDB accession number	100622
Name	oriT_pHS191
Sequence Completeness	intact
oriT length	126 nt
oriT sequence	AAACAGGCACGTTACCGATTGTCTACAAAAAAGAGCTTCGCCTTTTTCGTATCCAATCGA CGTGCCAAAGGGGATACCCCTTTGAAACCCCGCAGAGCGGGAAAGCGTTGTCGTTGTTGG TTGTTG
IR (inverted repeat)	IR1: [28-33] [42-47] nt (AAAAAG..CTTTTT) IR2: [62-73] [77-88] nt (GTGCCAAAGGGG..CCCCTTTGAAAC)
Location of nic site	_
Conserved sequence flanking the nic site	_
Note	predicted by the oriTfinder
	L:28-33;R:42-47;L:62-73;R:77-88

Visualization of oriT structure

Reference
N/A

I. Information of Relaxase

ID	694
Name	Relaxase_pHS191
GenBank accession number	WP_080348830
Family	MOB_P
Length	1249 aa
UniProt ID	_
PDB ID	_
Pfam	Relaxase [PF03432.13], Evalue: 3.40E-07, Aligned region: 10..269
Note	putative relaxase
Protein sequence [Download]	MLIRVSGYNTGAQEYLEQGNKSGREFTRDELDHRLIIEGQLSVTRAIYESIPDHGQDRYL TFTLSFKEDTVSPELLKAVTTDFKNFFMHAYKPEEFNLYAEAHLPKMKTVTDRKTGEVID RKPHIHIIIPRINLLSGNEANPVDVYKNHEKYFEAFQEHINQKYGLSSPRENVRADITDA ASVLSRYKGDDFYGKNRQFKQQLVKQVIERGVTSRADFYALVAEHGETRIRNEGKDNEYI SVKLPGDAKGTNLKDTIFQDAFFIRRELKKPPLEASVIQERLLAWPQRAREIKYVNKATP KFRKQYSQASPEERVRLLAERENNFYRAHGDDYESVHTWQRQRDNQRSSAEAAGRRTAAP ADGLQDLSVSDVADHRQAGPTRSRDGALLLPTDAHVHVGQSQPGGDSGLRSSVPAGGRGR RAGSTTERGRGGSQPAAVSQETKGTATPAGATGRRRAGAGKSRNTRVRAGRVVPPYAQNP HRVATIADIEERGRRLFDPLKRPSDNALVFYRSSSHPQVVDQLPQARAATTTPVQSTAGR RPRSSGKPRPPRQWRPGAVPPYAKNPHRVATVADIEQRARMLFDPLKRPADKALVFKRAS IKALTVNKHASTVAAYFTRQAQHNQIAPAHRRAIRRIDQQYFALRRAVFSDQRLTRQDKA QLVSVLTFERLKAREQFHKPQPNIEVNLMGSAAIRNLLDDEKEDPGFSISGARGPGPEGV RDRVKRVMDRFAKQIDPVAASERARDLSAKDLYTRKAKFSQNVHYLDKQTDKTLFVDTGT TISMRRTGITEAGVSVALQLARERFGSTLTINGTAEFKKLVIEAVAKNGLDVHFTDKAMN QSLADRRAELDIERGGQSIGPATDLPRHVDDATRDVRDQADRLGVTVPIEALYGQGKTAD QVSQALATQLDTVPEPERIAFVETVAITLAIPERGEPKGDQAFAQWQAQRAQPTADSAAT ATAETQTGVPTPSDTAPEPVTPQAAKPALANDPALQSPSELVRLEAQWRRDFPMSETDVR ASDTVMGLRGEDHAVWIIATNDKTPEAAAMLTVYMENDSYREAFKASIVAAYKQVENSPK LIDDLDHLTAMAAQIVNEVEDRLYPAPQAATGQTAPSRSKVIEGTLIEHGEAPYQHNDDN QMSYFVTLKPEGGKPRTVWGVGLEEAMSDADLKQGDQVRLEDLGTQPVVVQVIEEDGTVT DKTVNRREWSAQPVAPEREVAETTPKGQAIAAGTPELSSPDEEDGMNMD

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	1082
Plasmid name	pHS191
GenBank accession number	NZ_CP006257.1
Genome size	52548 bp
Coordinate of oriT [Strand]	46795..46920 [+]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Pseudomonas syringae pv. syringae HS191 [1324932]

Reference

[1] Ravindran A et al (2015) Comparative genomics of Pseudomonas syringae pv syringae strains B301D and HS191 and insights into intrapathovar traits associated with plant pathogenesis. Microbiologyopen. 4(4):553-73. [PMID:25940918]