 oriTDB accession number | 100604 |
| Name | oriT_pH1519-7  |
Sequence Completeness  | intact |
| oriT length | 82 nt |
| oriT sequence | GGGTGTCGGGGCGCAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTA ACCATGCGGCATCAGTGCGGAT |
| IR (inverted repeat) | [3-12] [16-25] nt (GTGTCGGGGC..GCCCTGACCC) |
| Location of nic site | [56-57] nt |
| Conserved sequence flanking the nic site | CTGG|CTTA |
| Note | predicted by the oriTfinder |
Visualization of oriT structure Reference| ID | 676 |
| Name | MobA_pH1519-7 |
| GenBank accession number | YP_009071086 |
| Family | MOBP |
| Length | 533 aa |
| UniProt ID | A0A075MG93 |
| PDB ID | _ |
| Pfam | Relaxase [PF03432.13], Evalue: 8.00E-20, Aligned region: 65..262 |
| Note | putative relaxase |
| Protein sequence [Download] | MSCAGCVWLSGNRGRGMIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEVRELI DATPFAKKYTSGVLSFAEKELPPGGREKVMASFERVLMPGLEKNQYSILWVEHQDKGRLE LNFVIPNMELQTGKRLQPYYDRADRPRIDAWQTLVNHHYGLHDPNAPENRRTLTLPDNLP ETKQALAEGVTRGIDALYHAGEIKGRQDVIQALTEAGLEVVRVTRSSISIADPNGGKNIR LKGAFYEQSFADGRGVREKAERESRIYRENAEQRVQEARRICKRGCDIKRDENQRRYSPV HSLDRGIAGKTPGRGERGDDAAQEGRVKAGREYGHDVTGDSLSPVYREWRDALVSWREDT GEPGRNQEAGRDIAETEREDMGRGVCAGREQEIPCPSVREISGGDSLSGERVGTSEGVTQ SDRAGNTFAERLRAAATGLYAAAERMGERLRGIAEDVFAYATGQRDAERAGHAVESAGAA LERADRTLEPVIQRELEIREERLIQEREHVLSLERERQPEIQERTLDGPSLGW |
Reference| ID | 1064 |
| Plasmid name | pH1519-7 |
| GenBank accession number | NC_025178.1 |
| Incompatibility group | ColRNAI |
| Genome size | 7036 bp |
| Coordinate of oriT [Strand] | 2772..2853 [-] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Escherichia coli Human-1519 [562] |
Reference| [1] Wang J et al (2014) Nucleotide sequences of 16 transmissible plasmids identified in nine multidrug-resistant Escherichia coli isolates expressing an ESBL phenotype isolated from food-producing animals and healthy humans. J Antimicrob Chemother. 69(10):2658-68. [PMID:24920651] |