 oriTDB accession number | 100600 |
| Name | oriT_pCTXM5-1845  |
Sequence Completeness  | intact |
| oriT length | 175 nt |
| oriT sequence | GGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTAC TATGTTGGCATGGATGCGGAAATCAGTGAAGTGCTTCATGTGGAAGGAGAAAAAAGGTGG CACCGGCGCGTCAGCAGAATATGCGATACAGGATATATTCCGCTTCCTCGCTCAC |
| IR (inverted repeat) | [2-11] [15-24] nt (GTTTCGGGGC..GCCCTGAACC) |
| Location of nic site | [55-56] nt |
| Conserved sequence flanking the nic site | CTGG|CTTA |
| Note | predicted by the oriTfinder |
Visualization of oriT structure Reference| ID | 672 |
| Name | MobA_pCTXM5-1845 |
| GenBank accession number | YP_009069721 |
| Family | MOBP |
| Length | 515 aa |
| UniProt ID | I6ZWA6 |
| PDB ID | _ |
| Pfam | Relaxase [PF03432.13], Evalue: 7.20E-15, Aligned region: 66..264 |
| Note | putative relaxase |
| Protein sequence [Download] | MPDLSGCGTPFLRKERTMIVKFHPRGRGGGAGPVDYLLGKDRQREGATVLQGKPEEVREL IDASPYVKKYTSGVLSFAEADLPPGQREKLMASFERVLMPGLDKDQYSILWVEHADKGRL ELNFLIPNTELLTGRRLQPYYDRADRPRIDAWQTIVNGRLGLHDPNAPENRRALVTPSGL PKTTQEAAEAITRGLLSLASSGELKSRQDVTDTLEGAGFEVVRTTKSSISIADPDGGRNI RLKGAIYEQSFYGLEGLRGEIESAAAEYRRDAESRIQRARAVCQSGTERKREENQRRHQR PRAEYERGDGEKPAERAADGREDMAHHPDGVSAADRHEREHSVVAGAADNRQLHASSSAG RYPGENDRPDVGSALSGEQRRPEVSYPAAGDANRSHPLRRDDMDPPETGVAENDRAGKAV AERIRAATAGLLAKAGRMGERLRGMAEHVWAYATGERDAERARVGLEHAGAEFKRAAAPL VRELNAIELRQRENEYQKTLELERQPQKTYRGPTL |
Reference| ID | 1060 |
| Plasmid name | pCTXM5-1845 |
| GenBank accession number | NC_025150.1 |
| Genome size | 8215 bp |
| Coordinate of oriT [Strand] | 1959..2133 [+] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Salmonella enterica subsp. enterica serovar Typhimurium [90371] |
Reference| [1] Kozyreva VK et al (2014) Long-term dissemination of CTX-M-5-producing hypermutable Salmonella enterica serovar typhimurium sequence type 328 strains in Russia, Belarus, and Kazakhstan. Antimicrob Agents Chemother. 58(9):5202-10. [PMID:24957829] |