oriTDB
The information of the oriT region
oriTDB accession number 100583
Name oriT_pECL18  insolico
Sequence Completeness core
oriT length 51 nt
oriT sequence GTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATAC
IR (inverted repeat)[1-10] [14-23] nt  (GTGTCGGGGC..GCCATGACCC)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note predicted by the oriTfinder
L:1-10;R:14-23
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 655
Name MbeA_pECL18 insolico
GenBank accession number YP_009062823
Family MOBP
Length 517 aa
UniProt ID O69424
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 4.40E-20, Aligned region: 48..246
Note putative relaxase
Protein sequence [Download] MIVKFHARGKGGGSGPVDYLLGRESNREGATVLQGNPEEVRELIDATPFAKKYTSGVLSF
AEKELPPGGREKVMASFERVLMPGLEKNQYSILWVEHQDKGRLELNFVIPNMELQSGKRL
QPYYDRADRPRIDAWQTLVNHHYWLHDPNAPENRRILTLPDNLPETKQALAESVTRWIDA
LYHVGEIKGRQDVIQALTEAGIEVVRVTRSSISIADPNGGRNIRLKGAFYEQSFTDGRGV
REKAERESRIYRENAEQRVQEARRICKRGCDIKRDENQRRYSPVHSLDREIAGKTPGRGE
RGDDAAQEGCVKAGREYGHDVTGDSLSPVYREWRDALVSWREDTGEPGRNQEAGRDIAET
EREDMGRGVCAGREQEIPCPSVREISGGDSLSGERVGTSEGVTQSDRAGNTFAERLRAAA
TGLYAAAERMGERLRGIAEDVFAYATGQRDAERAGHAVESAGAALERADRTLEPVIQREL
EIREERLIQEREHVLSLERERQPEIQERTLDGPSLGW
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1043
Plasmid name pECL18
GenBank accession number NC_025004.1
Incompatibility group ColRNAI
Genome size 5571 bp
Coordinate of oriT  [Strand] 1..51 [-]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Enterobacter cloacae 18k [550]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU