oriTDB
The information of the oriT region
oriTDB accession number 100517
Name oriT_pSTE1  insolico
Sequence Completeness core
oriT length 41 nt
oriT sequence CACTTTATGAATATAAAGTATAGTGTGTTATACTTTACATG
IR (inverted repeat)[2-8] [13-19] nt  (ACTTTAT..ATAAAGT)
Location of nic site [27-28] nt
Conserved sequence flanking the
  nic site 		GTG|TTA
Note predicted by the oriTfinder
L:2-8;R:13-19;D:27-28
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 588
Name Mob_pSTE1 insolico
GenBank accession number YP_007419109
Family MOBV
Length 409 aa
UniProt ID L8BAH8
PDB ID _
Pfam Mob_Pre [PF01076.18], Evalue: 1.10E-71, Aligned region: 1..193
Note putative relaxase
Protein sequence [Download] MSMIVARMQKMKAENLVGIGNHNQRKTKNHSNPDIDTSLSKLNYDLVDRTQNYKTDIENF
INENKTTTRAVRKDAVLVNEWIISSDKDFFDNLTESEIENFFERSKDYFAEKFGEKNIRY
ATVHLDESTPHMHMGIVPFDKDNKLSAKRVFNRQALRDVQEELPKYLQDFQFEIERGQKG
SERKNLTVPEFKKLKEEEREIKKELEIKKDELMAYTKENKIDKEIDITPIKEMEDVEIET
DEKSLFGITKTKTVRQWTGNIVLSEKDYLKLRQKVNKGKQAEGKLEAILETDVYQENKEL
KNELKDQIDKNDKDIDDYNDLVKRYNNLYEENTSLKNQIGDLKEEIKLIYQSTKRFFKDR
ISDFKAFKEVFKELADSISNISREKGLDSSFKKEFDRENKKKRTKGMSR
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 978
Plasmid name pSTE1
GenBank accession number NC_020237.1
Genome size 11951 bp
Coordinate of oriT  [Strand] 7868..7908 [+]
Drug resistance insolico streptomycin resistance; resistance to macrolides; tetracycline resistance
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Staphylococcus hyicus HW17 [1284]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU