oriTDB
The information of the oriT region
oriTDB accession number 100478
Name oriT_pMSA16  insolico
Sequence Completeness core
oriT length 41 nt
oriT sequence CACTTTATGGATATAAAGTATAGTGTGCTATACTTTACATG
IR (inverted repeat)[2-8] [13-19] nt  (ACTTTAT..ATAAAGT)
Location of nic site [27-28] nt
Conserved sequence flanking the
  nic site 		GTG|CTA
Note predicted by the oriTfinder
L:2-8;R:13-19;D:27-28
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 549
Name Mob_pMSA16 insolico
GenBank accession number YP_006958114
Family MOBV
Length 376 aa
UniProt ID H9C6Q0
PDB ID _
Pfam Mob_Pre [PF01076.18], Evalue: 1.40E-69, Aligned region: 23..214
Note putative relaxase
Protein sequence [Download] MDIKYSVLYFTWKLTEIRGRVFVSFAVVRMQKMKSPDLKGMQFHNQRERESRTNPDIDPD
REHLNYDLLHQEKIDYNQQVKAIIESQKVSERKTRKDAVLVNELLVTSDRKFFDGLDPAE
QKRFFEESHKLFSERYGKQNIAYATVHNDEKTPHMHLGVVPMRDGKLQGKNVFNRQELQW
MQEEFPKHMQSVGFEVERGIASDRKHIEMSRFKALTLNEEIKTLEKETEALRNALTASKK
VDELQVTKPSLFDRNHVKLPVEDFEALKARAKATEAIERTIEAHEKRFDDMVDNVIDSDR
KLDQEKRKTAQLQKENNGLKKENLDLQKENKTLKSQLNVLMEFAKSQLEKFKEWQKERQQ
EKENNIARKRDQELER
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 939
Plasmid name pMSA16
GenBank accession number NC_019144.1
Genome size 7054 bp
Coordinate of oriT  [Strand] 2524..2564 [+]
Drug resistance insolico macrolide resistance
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Staphylococcus aureus SA16 [1280]
Reference
[1] Wang XM et al (2012) Methicillin-resistant Staphylococcus aureus ST9 from a case of bovine mastitis carries the genes cfr and erm(A) on a small plasmid. J Antimicrob Chemother. 67(5):1287-9. [PMID:22334606]

Microbial Bioinformatics Group in MML, SJTU