oriTDB
The information of the oriT region
oriTDB accession number 100383
Name oriT_pSS-03  insolico
Sequence Completeness core
oriT length 41 nt
oriT sequence CACTTTATGGATATAAAGTATAGTGTGCTATACTTTACATG
IR (inverted repeat)[2-8] [13-19] nt  (ACTTTAT..ATAAAGT)
Location of nic site [27-28] nt
Conserved sequence flanking the
  nic site 		GTG|CTA
Note predicted by the oriTfinder
L:2-8;R:13-19;D:27-28
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 454
Name Mob_pSS-03 insolico
GenBank accession number YP_004888092
Family MOBV
Length 376 aa
UniProt ID _
PDB ID _
Pfam Mob_Pre [PF01076.18], Evalue: 1.40E-69, Aligned region: 23..214
Note putative relaxase
Protein sequence [Download] MDIKYSVLYFTWKLTEIRGRVFVSFAVVRMQKMKSPDLKGMQFHNQRERESRTNPDIDPD
REHLNYDLLHQEKIDYNQQVKAIIESQKVSERKTRKDAVLVNELLVTSDRKFFDGLDPAE
QKRFFEESHKLFSERYGKQNIAYATVHNDEKTPHMHLGVVPMRDGKLQGKNVFNRQELQW
MQEEFPKHMQSVGFEVERGIASDRKHIEMSRFKALTLNEEIKTLEKETEALRNALTASKK
VDELQVTKPSLFDRNHVKLPVEDFEALKARAKATEAIERTIEAHEKRFDDMVDNVIDSDR
KLDQEKRKTAQLQKENNGLKKENLDLQKENKTLKSQLNVLMEFAKSQLEKFKEWQKERQQ
EKENNIARKRDQELER
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 844
Plasmid name pSS-03
GenBank accession number NC_016054.1
Genome size 7122 bp
Coordinate of oriT  [Strand] 5688..5728 [-]
Drug resistance insolico resistance to chloramphenicol and florfenicol; resistance to macrolides
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Staphylococcus arlettae 2-144 [29378]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU