oriTDB
The information of the oriT region
oriTDB accession number 100374
Name oriT_pS51A  insolico
Sequence Completeness intact
oriT length 187 nt
oriT sequence GGTTTTTAGCGGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTA TACTGGCTTACTATGTTGGCATGAGTGCGGTTATCAGGAAAGTGCTTCATGTAGCAGGAG AAAATATGCGGCTGAGACGCGTCAGTGCTGAATGCCGGTTCAGGAGATATGACGCCTCCT CGCTCAC
IR (inverted repeat)[15-22] [26-33] nt  (TTCGGGGC..GCCCTGAA)
Location of nic site [66-67] nt
Conserved sequence flanking the
  nic site 		CTGG|CTTA
Note predicted by the oriTfinder
L:15-22;R:26-33;D:66-67
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 445
Name Mob_pS51A insolico
GenBank accession number YP_004272405
Family MOBP
Length 511 aa
UniProt ID E9RGW1
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 3.10E-14, Aligned region: 56..255
Note putative relaxase
Protein sequence [Download] MRCWKKGGMMIVKFHPRGRGGGAGPVDYLLGKDRQREGATVLQGKPEEVRELIDASPYAK
KYTSGVLSFAEAELPPGQREQIMASFERVLMPGLDKDQYSILWVEHTDKGRLELNFLIPN
TELLAGKRLQPYYDRADRPRIDAWQTVVNGRLGLHDPNAPENRRLLVTPSALPETKLEAA
QAITRGLLSLASSGGLKTREDVTGALTAAGFEVVRTTKNSISIADPDGGRNIRLKGAIYE
QSFSAGEGLGAAIESAAAEYRRDAESRIQRARAVCKSGTERKREENQRRHQRPRAGYDRG
DAVEPPERAAYGRPDMADHHPGLGTADRHEREHSVVAGAADHRELPDYPGAGADAGHAVG
EEPRRAAVALRGEETVLRQSEPESGSVRGGRELDGTGEEIAHDGTGKTVADRIRAATSGL
LAKAGRVGERLRGMAEDVWSYATGERGAERARHALESAGGELEQAVTAFEPVVQRHEMAV
AAERAYEQRQHEKELAETRSRQRSYNGPTLG
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 835
Plasmid name pS51A
GenBank accession number NC_015175.1
Genome size 5782 bp
Coordinate of oriT  [Strand] 4821..5007 [-]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Enterobacter cloacae [550]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU