oriTDB

oriT
Relaxosome
T4CP
Plasmid&Host

The information of the oriT region

oriTDB accession number	100372
Name	oriT_p157F-NC1
Sequence Completeness	core
oriT length	35 nt
oriT sequence	TGAATGTTACCACCGGTAACATGTAAGTGCGCCCT
IR (inverted repeat)	[4-11] [15-22] nt (ATGTTACC..GGTAACAT)
Location of nic site	[31-32] nt
Conserved sequence flanking the nic site	TAAGTGCG\|CCCT
Note	predicted by the oriTfinder
	L:4-11;R:15-22;D:31-32

Visualization of oriT structure

Reference
N/A

I. Information of Relaxase

ID	443
Name	MobA_p157F-NC1
GenBank accession number	WP_012477134
Family	MOB_Q
Length	370 aa
UniProt ID	E8MXD2
PDB ID	_
Pfam	MobA_MobL [PF03389.14], Evalue: 2.50E-56, Aligned region: 1..224
Note	putative relaxase
Protein sequence [Download]	MRDERTGEAFNGFGRRERVEHVCTMLPEGAPGEYLDPERLFNAVEMAEKRSDARPAKKIM VALPREFDARERFRALEDFISWNITANGYACTYAIHTDKDGRNPHAHILVANRRIDPKTG RWAAKSRSEFALDANGRRIPVIDPDTGRQKIGARNRKVWKRVNVSNNPLDSKEFLERLRR EWADSCNALLPGYAVIDHRSFKARGIERIPTIHEGYASREMEKRGGRGDLCEENRRIQAL NRLLDALRAMIGRLSDQAQGILTAVKRRQRPSGAPQAPSSPEPAERPQERPQARETPPQA PQEPPKPIRTKKALTDRFKTRLDERLAENERKQAEKQAEPDMEETWDLSDPADPLNIGMG WGTGGHGLGL

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	833
Plasmid name	p157F-NC1
GenBank accession number	NC_015053.1
Genome size	4895 bp
Coordinate of oriT [Strand]	4618..4652 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Bifidobacterium longum subsp. infantis 157F [565040]

Reference

[1] Fukuda S et al (2011) Bifidobacteria can protect from enteropathogenic infection through production of acetate. Nature. 469(7331):543-7. [PMID:21270894]