 oriTDB accession number | 100367 |
| Name | oriT_pWZ1668  |
Sequence Completeness  | incomplete |
| oriT length | 47 nt |
| oriT sequence | GTCATAGAATAATTCTTTGTTTTCTTCAATCGATTCAATAGAAATAT |
| IR (inverted repeat) | IR1: [3-10] [12-19] nt (CATAGAAT..ATTCTTTG) IR2: [25-31] [32-38] nt (TTCAATC..GATTCAA) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site | _ |
| Note | predicted by the oriTfinder |
Visualization of oriT structure Reference| ID | 438 |
| Name | Nickase_pWZ1668 |
| GenBank accession number | YP_003864133 |
| Family | MOBQ |
| Length | 654 aa |
| UniProt ID | E0X5B7 |
| PDB ID | _ |
| Pfam | MobA_MobL [PF03389.14], Evalue: 4.10E-67, Aligned region: 11..235 |
| Note | putative relaxase |
| Protein sequence [Download] | MTIAKREGGKRSLIAMASYRSGEKLYSELYEKTNLYNHRTVKPEAFILKPDYVPNEFLDR QTLWNKMELAEKSPNAQLCREVNVALPIELNNSDQRMLIEDFVKDNFVSEGMIADVAIHR DDENNPHAHIMLTMREVDSEGNILNKRKRIPKLDENGNQIFNEKGQRVTVSIKTNDWDRK SLVSEIRKDWADKVNQYLKDRNIDQQITEKSHAELGKKELPTIHEGFYSKKLEDKGVISE LKRKNLEIQSYNDVLSELDKLENQEKVLKQDQNFTLKFEKTFSPLEKKELKNLSKELKIF VNDENIDKRISELKRWENSLIFNNKMEIQKQRLMLSKISSERDMLTKANEILDKQAERFF KKSYPSLNIDKFSNHEVRAMVNETIFRKQLLNKDQLAEVIYNERVVEKEESKKIFKEKPF QTSRYLDSKIKQVEDSITKENNPERKEILSIKKEKLIGIKQGLIEYVQSEVERKFDKNVS IDSVIEGEMLLAKADYYKTTDFSKVEGVARFSSEEINSMLEQSKGFLTNIQTVKIPNDCQ GVFFVQDSMKHIDELSPLAKHNLKKVVNRNAYLPDSDKIELSKEIENTNKDQSQELDKDV PEKNEVTVKMFQFAKSINRLLSGNQLQKKRNLDKLIKQTKAKENQSLQRNIPLR |
Reference| ID | 828 |
| Plasmid name | pWZ1668 |
| GenBank accession number | NC_014475.1 |
| Genome size | 48365 bp |
| Coordinate of oriT [Strand] | 35503..35549 [+] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Enterococcus faecalis [1351] |
Reference| [1] Zhu W et al (2010) Dissemination of an Enterococcus Inc18-Like vanA plasmid associated with vancomycin-resistant Staphylococcus aureus. Antimicrob Agents Chemother. 54(10):4314-20. [PMID:20660665] |