oriTDB

The information of the oriT region

oriTDB accession number	100291
Name	oriT_pBS512_7
Sequence Completeness	core
oriT length	58 nt
oriT sequence	GTGTCGGGGCGCAGCCATGACCCAGTCACGTCGCGATAGCGGAGTGTATACAGGCTTA
IR (inverted repeat)	[1-10] [14-23] nt (GTGTCGGGGC..GCCATGACCC)
Location of nic site	[54-55] nt
Conserved sequence flanking the nic site	CAGG\|CTTA
Note	predicted by the oriTfinder
	L:1-10;R:14-23;D:54-55

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GTGTCGGGGCGCAGCCATGACCCAGTCACGTCGCGATAGCGGAGTGTATACAGGCTTA

Reference
N/A

I. Information of Relaxase

ID	362
Name	MobC_pBS512_7
GenBank accession number	WP_012421781
Family	Other
Length	107 aa
UniProt ID	B2TSK0
PDB ID	_
Pfam	MobC [PF05713.10], Evalue: 7.60E-13, Aligned region: 50..94
Note	putative relaxase
Protein sequence [Download]	MLTIRVTDDEHARLLERCEGKQLAVWMRRVCLGEPVARSGRLPTLAPPLLRQLAAIGNNL NQAARKVNSGQWSSGNRVQVVAALMAIGDELRRLRLAVREQGTRDDS

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
N/A

N/A

Information of plasmid

ID	753
Plasmid name	pBS512_7
GenBank accession number	NC_010672.1
Incompatibility group	ColRNAI
Genome size	7437 bp
Coordinate of oriT [Strand]	7103..7160 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Shigella boydii CDC 3083-94 [344609]

Reference
N/A