oriTDB
The information of the oriT region
oriTDB accession number 100286
Name oriT_pTZ4  insolico
Sequence Completeness core
oriT length 53 nt
oriT sequence CCATCAAGCCGGTATATTCAGAACGAAGTGGCTAGAATATACGACGCTTGCCA
IR (inverted repeat)[12-19] [35-42] nt  (GTATATTC..GAATATAC)
Location of nic site [50-51] nt
Conserved sequence flanking the
  nic site 		CGCTTG|CCA
Note predicted by the oriTfinder
L:12-19;R:35-42;D:50-51
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 357
Name pTZ4_p3_pTZ4 insolico
GenBank accession number YP_001595587
Family MOBP
Length 315 aa
UniProt ID A9CQY2
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 5.20E-79, Aligned region: 8..239
Note putative relaxase
Protein sequence [Download] MATTKLGNTKSASRAINYAEKRAEEKSGLNCDVDYAKSAFKQTRALYGKEDGIQAHTVIQ
SFKPGEVTPEQCNQLGLELAEKIAPNHQVAVYTHTDKDHYHNHIVINSVDLETGKKYQSN
KKQRDLVKKENDNICREHGLSVTERGIAKMRYTQAEKGIVFDRDEYSWKDELRDLIENAK
THTSNLETFSEHLEEKGVGVKLRGETISYKPENENKWVRGRTLGSEYEKGAIDHEHERHQ
KQQREPEYADEFKINWDAVEQHTEQLKQRRVERAQETKQAHSKISSRDTRESENQRERAK
GNNIRIERGDEGLSR
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 748
Plasmid name pTZ4
GenBank accession number NC_010111.1
Genome size 4555 bp
Coordinate of oriT  [Strand] 3101..3153 [+]
Drug resistance insolico chloramphenicol resistance
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Staphylococcus aureus TP4 [1280]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU