oriTDB
The information of the oriT region
oriTDB accession number 100262
Name oriT_pSES22  insolico
Sequence Completeness core
oriT length 41 nt
oriT sequence CACTTTATGGATATAAAGTATAGTGTGTTATACTTTACATG
IR (inverted repeat)[2-8] [13-19] nt  (ACTTTAT..ATAAAGT)
Location of nic site [27-28] nt
Conserved sequence flanking the
  nic site 		GTG|TTA
Note predicted by the oriTfinder
L:2-8;R:13-19;D:27-28
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 333
Name Mob_pSES22 insolico
GenBank accession number YP_415518
Family MOBV
Length 420 aa
UniProt ID Q2YHL4
PDB ID _
Pfam Mob_Pre [PF01076.18], Evalue: 5.80E-73, Aligned region: 1..193
Note putative relaxase
Protein sequence [Download] MSYAVCRMQKVKSAGLKGMQFHNQRERESRTNEDIDRERTHENYDLQNDENINYNERVKD
IIDSQKTGTRKTRKDAVLVNELLVTSDRDFFERLDPGEQKRFFEESYKLFSERYGKQNIA
YATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQDKFPEHMKKQGFELKRGERG
SDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVKSDLEVPAKRHMKNVEVPT
GEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDNDKLKQHVRNLMSTDMAREYK
KLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKSKISDLKRDVSLIYESTKEFLK
ERTDGLKAFKNVFKGFVDQIKDKTAQFQEKHDLEPKKNEFELTHNREVKKERSRDQGMSL
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 724
Plasmid name pSES22
GenBank accession number NC_007621.1
Genome size 4040 bp
Coordinate of oriT  [Strand] 2547..2587 [+]
Drug resistance experimental resistance to erythromycin and clindamycin
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Staphylococcus saprophyticus 44 [29385]
Reference
[1] Hauschild T et al (2006) Characterization of a novel type of MLSB resistance plasmid from Staphylococcus saprophyticus carrying a constitutively expressed erm(C) gene. Vet Microbiol. 115(1-3):258-63. [PMID:16487670]

Microbial Bioinformatics Group in MML, SJTU