oriTDB
The information of the oriT region
oriTDB accession number 100258
Name oriT_pE33L5  insolico
Sequence Completeness core
oriT length 39 nt
oriT sequence CTTTACGATAGTAAAGTATAGTGTGCTATACTTTACATG
IR (inverted repeat)[1-8] [9-16] nt  (CTTTACGA..TAGTAAAG)
Location of nic site [25-26] nt
Conserved sequence flanking the
  nic site 		GTG|CTA
Note predicted by the oriTfinder
L:1-8;R:9-16;D:25-26
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 329
Name Putative relaxase of pE33L5 insolico
GenBank accession number WP_000119308
Family MOBV
Length 411 aa
UniProt ID Q4V103
PDB ID _
Pfam Mob_Pre [PF01076.18], Evalue: 1.70E-63, Aligned region: 1..196
Note putative relaxase
Protein sequence [Download] MSYAICRMQKFKMRDVKGIQIHNQREKESHTNHDIESERTHLNYDLHNDGHIDYLKTVKD
KIEQNVETNRAIRKDAVVMCEFVVTSDKEFFDVLDMVDPVQQKVFFKEAYNFLKNRYGEQ
NIVHAAVHLDEKTPHMHVGMVPVTEENKLSAKQIFNRKELVSLQDDFHAHMVEKGFYLER
GVSSDKKHVEMRKLKAMTAKEEIKALEKEMGQCLQKKEVVNKQMEQLESRLNQLQNAVKS
TNKVDKMEVKHKGGILRSKTVEMSVEDFEELKTKAKASEAFKRENMTLHRKNEALQASNT
DLHTTVKRLEKENEGLKPYKARYERLAKLMDEMNKFYEKFIPKELSKFHEIIGFCKRKVN
ASINRFSSLRYSEKELNENEKRGYETASKFLENQRKEQKQQRKERGDEREL
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 720
Plasmid name pE33L5
GenBank accession number NC_007104.1
Genome size 5108 bp
Coordinate of oriT  [Strand] 2230..2268 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Bacillus cereus E33L [288681]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU