oriTDB

The information of the oriT region

oriTDB accession number	100219
Name	oriT_pIE522
Sequence Completeness	core
oriT length	39 nt
oriT sequence	GACTTACGCGCACCGAAAGGTGCGTATTGTCTATAGCCC
IR (inverted repeat)	[9-14] [19-24] nt (CGCACC..GGTGCG)
Location of nic site	[32-33] nt
Conserved sequence flanking the nic site	TGTCT\|ATAGC
Note	_
	L:9-14;R:19-24;D:32-33

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GACTTACGCGCACCGAAAGGTGCGTATTGTCTATAGCCC

Reference

[1] Revilla C et al (2008) Different pathways to acquiring resistance genes illustrated by the recent evolution of IncW plasmids. Antimicrob Agents Chemother. 52(4):1472-80. [PMID:18268088]

N/A

Information of plasmid

ID	212
Plasmid name	pIE522
GenBank accession number	EU247928.1
Incompatibility group	IncW
Genome size	38 kb
Coordinate of oriT [Strand]	_
Drug resistance	resistance to gentamicin, kanamycin, sulfonamide and tobramycin
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Klebsiella pneumoniae [573]

Reference

[1] Revilla C et al (2008) Different pathways to acquiring resistance genes illustrated by the recent evolution of IncW plasmids. Antimicrob Agents Chemother. 52(4):1472-80. [PMID:18268088]