oriTDB

The information of the oriT region

oriTDB accession number	100204
Name	oriT_pIMVS1
Sequence Completeness	core
oriT length	63 nt
oriT sequence	GGTTTCGGGGCGCAGCCGTGAACCAGTCACGCAGGCGCTAGCGGAGTGTATACTGGCTTA GTA
IR (inverted repeat)	[17-21] [27-31] nt (CGTGA..TCACG) [36-39] [40-43] nt (CGCT..AGCG)
Location of nic site	[56-57] nt
Conserved sequence flanking the nic site	CTGG\|CTTA
Note	_
	L:17-21;R:27-31;L:36-39;R:40-43;D:56-57

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

GGTTTCGGGGCGCAGCCGTGAACCAGTCACGCAGGCGCTAGCGGAGTGTATACTGGCTTA

61

GTA

Reference

[1] Dery KJ et al (1997) Characterization of the replication and mobilization regions of the multiresistance Klebsiella pneumoniae plasmid pJHCMW1. Plasmid. 38(2):97-105. [PMID:9339467]

[2] Astill DS et al (1993) Characterization of the small cryptic plasmid, pIMVS1, of Salmonella enterica ser. Typhimurium.. Plasmid. 30(3):258-67. [PMID:8302933]

N/A

Information of plasmid

ID	197
Plasmid name	pIMVS1
GenBank accession number	X63534.1
Genome size	3.8 kb
Coordinate of oriT [Strand]	_
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Salmonella enterica serovar Typhimurium [90371]

Reference
N/A