oriTDB

The information of the oriT region

oriTDB accession number	100186
Name	oriT_pBC16
Sequence Completeness	core
oriT length	38 nt
oriT sequence	CACTTTATGAATATAAAGTATAGTGTGTTATACTTTAC
IR (inverted repeat)	[2-8] [13-19] nt (ACTTTAT..ATAAAGT)
Location of nic site	[27-28] nt
Conserved sequence flanking the nic site	TAGTGTG\|TTAT
Note	_
	L:2-8;R:13-19;D:27-28

Visualization of oriT structure

Reference

[1] Grohmann E et al (2003) Conjugative plasmid transfer in gram-positive bacteria. Microbiol Mol Biol Rev. 67(2):277-301. [PMID:12794193]

I. Information of Relaxase

ID	179
Name	Mob_pBC16
GenBank accession number	NP_043522
Family	MOB_V
Length	441 aa
UniProt ID	Q51989
PDB ID	_
Pfam	Mob_Pre [PF01076.18], Evalue: 2.20E-73, Aligned region: 21..214
Note	relaxase
Protein sequence [Download]	MVAGKSENASHLCHLKRSDLHMSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHER TRENYDLKNDKNIDYNERVKEIIESQKTGTRKTRKDAVLVNELLVTSDRDFFEQLDPGEQ KRFFEESYKLFSERYGKQNIAYATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWL QDKFPEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSD KVKSDLEVPAKRHMKSVEVPTGEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARD NDRLKQHVRNLMSTDMAREYKKLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKS KISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNE FELTHNREVKKERSRDQGMSL

Reference
N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome

#	ID	Name	GenBank	Length	Note
1	257	_	_	_	_

N/A

Information of plasmid

ID	179
Plasmid name	pBC16
GenBank accession number	NC_001705.1
Genome size	4630 bp
Coordinate of oriT [Strand]	1144..1181 [-]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Bacillus subtilis GP7 [1396]

Reference
N/A