 oriTDB accession number | 100161 |
| Name | oriT_pTX14-2  |
Sequence Completeness  | incomplete |
| oriT length | 24 nt |
| oriT sequence | TTTGGTATAGTAGGCTATACCAAA |
| IR (inverted repeat) | [1-9] [16-24] nt (TTTGGTATA..TATACCAAA) |
| Location of nic site | [14-15] nt |
| Conserved sequence flanking the nic site | TAGTAGG|CTAT |
| Note | pMV158 superfamily |
Visualization of oriT structure Reference| [1] Andrup L et al (2003) The patchwork nature of rolling-circle plasmids: comparison of six plasmids from two distinct Bacillus thuringiensis serotypes. Plasmid. 49(3):205-32. [PMID:12749835] |
| ID | 155 |
| Name | Mob14-2_pTX14-2 |
| GenBank accession number | NP_705748 |
| Family | MOBV |
| Length | 445 aa |
| UniProt ID | Q8GLD7 |
| PDB ID | _ |
| Pfam | Mob_Pre [PF01076.18], Evalue: 4.60E-71, Aligned region: 1..192 |
| Note | relaxase |
| Protein sequence [Download] | MNKFAIIHMQKFQISDVQGIQKHNQRQGKSKSNLDIDYSKSEQNYDLLNQQKIRYESTIK QEISERVKRKPRANSVVLSEFVVTASPDYMHSLSLEEQKRYFESSLAFIQKRYGKQNTLY AMVHMDEATPHMHIGVMPITEDNRLSAKDMFMRKELISLQQDFPLEMREKGFDVERGEGS EKKHLSPQAFKEKQDLEVEVEQLSNVKTHLKTKVVETHNQLQQTTNYIEKQNETLQKIQQ QFLSLDKKIKEKKQEFETFRNQIPDKPVSMSYLREETKTEVTTKLFGKPEITEKKTGNIV VTREQWRDMTEKVNAAVIVKKDYERLQKTDLVKENQSLREDNKYLEETIEGNNLALKHSY KQNRKLEEVNKELHTEIGTLKAHIRDLQMNIKVLYQQTKKVFKEQFKAFRGLIKNELDMK GVDNQFEREHTREIRSRQKGYDMER |
Reference| [1] Andrup L et al (2003) The patchwork nature of rolling-circle plasmids: comparison of six plasmids from two distinct Bacillus thuringiensis serotypes. Plasmid. 49(3):205-32. [PMID:12749835] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 225 | _ |
| ID | 155 |
| Plasmid name | pTX14-2 |
| GenBank accession number | NC_004334.1 |
| Genome size | 6829 bp |
| Coordinate of oriT [Strand] | 2104..2127 [+] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Bacillus thuringiensis 4Q2 [1428] |
Reference