 oriTDB accession number | 100160 |
| Name | oriT_pGI1  |
Sequence Completeness  | incomplete |
| oriT length | 26 nt |
| oriT sequence | GTAAACTGTAGTGTGCTACAGTTTAC |
| IR (inverted repeat) | [1-10] [17-26] nt (GTAAACTGTA..TACAGTTTAC) |
| Location of nic site | [15-16] nt |
| Conserved sequence flanking the nic site | TAGTGTG|CTA |
| Note | pMV158 superfamily |
Visualization of oriT structure Reference| [1] Andrup L et al (2003) The patchwork nature of rolling-circle plasmids: comparison of six plasmids from two distinct Bacillus thuringiensis serotypes. Plasmid. 49(3):205-32. [PMID:12749835] |
| ID | 154 |
| Name | Mob1_pGI1 |
| GenBank accession number | NP_705753 |
| Family | MOBV |
| Length | 401 aa |
| UniProt ID | Q8GLD2 |
| PDB ID | _ |
| Pfam | Mob_Pre [PF01076.18], Evalue: 4.00E-64, Aligned region: 1..196 |
| Note | relaxase |
| Protein sequence [Download] | MSKFMVCHMQKFKMTDVKGLQIHNQREKESHSNSDIIQERTEQNYDLIHDKRKVDYKKII QNRIDNGVVSNRAIRKDAVVCCSFMISASPDYMNFLSPVEQRRFFEESVCFLKARYGEEN FVYASVHVDEKTPHMHVGMVPVNEKQKLSAYSFFKNKSELHDLQDKIYEHVKEKGFDIER GVSSDRKHLSTQRFKAVTLQQEIEKLEQEKKEIDSRLYDLKFSLNQAKSVDEIPVKEKGG FIRSKTVEIDSEDFESIKVLAKSSEVLRSENRRLKNEKIKIEREKDDLYKGQRFLERQVT DLKRENRGLKEANDFLKKTLERVKEMYKEKLPELAGMIGYVKGSILDKMNRKFLKRHFAG DDEVRGAQKFLNHKQEHEEQQKRLKQVRRSQQKNRDQGLER |
Reference| [1] Andrup L et al (2003) The patchwork nature of rolling-circle plasmids: comparison of six plasmids from two distinct Bacillus thuringiensis serotypes. Plasmid. 49(3):205-32. [PMID:12749835] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 224 | _ |
| ID | 154 |
| Plasmid name | pGI1 |
| GenBank accession number | NC_004335.1 |
| Genome size | 8254 bp |
| Coordinate of oriT [Strand] | 6421..6446 [+] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Bacillus thuringiensis H1.1 [1432] |
Reference