[1] Mela F et al (2008) Comparative genomics of the pIPO2/pSB102 family of environmental plasmids: sequence, evolution, and ecology of pTer331 isolated from Collimonas fungivorans Ter331. FEMS Microbiol Ecol. 66(1):45-62. [PMID:18355297] |
![]() | 140 |
![]() | TraR/VirD2_pTer331 ![]() |
![]() | YP_001672039 |
![]() | MOBP |
![]() | 364 aa |
![]() | B0ZB68 |
![]() | _ |
![]() | Relaxase [PF03432.13], Evalue: 3.70E-11, Aligned region: 73..302 |
![]() | nickase/relaxase activity |
![]() | MSKTVIDGIIKDWGERLHYSPVKGSKGRNIRSGGTTRAAKPAPPSGPATKEKVARTAKKT AEVMVKISGGGKNMKHIKAHMDYISRNGEVEIEDENGDIHQGMEAVRDVRDSWAKGKIGI PYEGEKRKEAFNIVLSMPPGTDRQAVKDAAREFAKQEFGNHQYVFAAHDDEKHPHVHLAV KAVGNDGIRLNPRKGDLQFWREQFAEKLRDQGIEANATPRRARGVVQKAEKQAVRHIDAE FERGKRQEPARVTRARKRDAEAEVTTGKKRANPAQDNISAARKDTQKAYGQIARALATGE AEDKQIALNIVRLVQTMPPVVTKHEALVQSLHGTGGKLAGREAEPKQPKRQEQGRAKPDD EQTR |
[1] Mela F et al (2008) Comparative genomics of the pIPO2/pSB102 family of environmental plasmids: sequence, evolution, and ecology of pTer331 isolated from Collimonas fungivorans Ter331. FEMS Microbiol Ecol. 66(1):45-62. [PMID:18355297] |
# | ID | Name | GenBank | Length | Note |
1 | 205 | _ ![]() |
![]() | 140 |
![]() | TraN/VirD4_pTer331 ![]() |
![]() | _ |
![]() | YP_001672044 |
![]() | VirD4/TraG |
![]() | 900 |
![]() | B0ZB73 |
![]() | _ |
![]() | T4SS-DNA_transf [PF02534.13], Evalue: 6.40E-34, Aligned region: 99..330 T4SS-DNA_transf [PF02534.13], Evalue: 3.00E-61, Aligned region: 344..651 TraG-D_C [PF12696.6], Evalue: 1.30E-21, Aligned region: 482..608 TrwB_AAD_bind [PF10412.8], Evalue: 4.80E-10, Aligned region: 387..624 Ribosomal_L12 [PF00542.18], Evalue: 1.60E-07, Aligned region: 299..365 |
![]() | ATPase, coupling the relaxosome with the transfer machinery |
![]() | MEMPKWLKWVLGVVVFIAATVGAVWLAGFFFFAFSKTNPFGKTDFSTWWTYWQFYQADPV IAKRLKVSGIVAAVVAYGAPIVALIAAMREVRSLHGEARFANASEIEKAGLFGNTGIIIG KLKNRFLMFAGMQFVLLAAPTRSGKGVGVVIPNLLNWSESVVVLDVKLENFLITSKFRAK WGQEVYLFNPFSISEDAEGNPLNGRTHRYNPLGYIGDDARLRVTDILAIGYSLYPGEGRD AFFDDAARNLFLGLTLYLCETPSLPRTMGELLRQSSGKGKPVKQHIQGIVTERNFREFGD VMLNDVGEDQAEVVKAIMAAAGISEAEAEKLCDDAPIVVVKDVAAAEIEQVEALFKEAGA EVEVTRKLVPITQWDGVGLPPLTMECVDALNRFTATSDNTLSSIMASFNVPLTIWASPIV DAATSANDFDLRDVRKKRMSIYLGIPANKLAEAKLLMNMFYTQLVNLNTNRLLHSSPELK YTVLMLDDEFTAPGRIGIIDKANSYMAGYGLRMLNIIQSPGQLEAEAPKGYGRENARTFV TNHACQIFFTPREQRDANEYSEALGYYTFKAKGSSRQLGGKAAGGRSESESDQKRALMMP QELKEMSQREQIISLENTKAIRCEKISYFSDHVFVDRLKSVTPSLAKLGKKLPTKKQLED AWGSGECAVSIPLLNLDLHEAVVQARSRALTVTDVAKGIDLRALALDFSKVPLPTGDGIE AEQVEAFVDGFFDALDAANEYDEDEAPDVDEDGASERPSDDELAALDAEAADDGGKVAVN TIEQADDEPAAAELVTGASRPGGGSVAKPEPQAEPEPEPDRGLGHDQADIEPDGPTDEDL AAMMEDFTPPDDGMMDEADMLAALDEMEAVPEYVEEAENDAPILDLSVLDKPLPSIKNAK |
[1] Mela F et al (2008) Comparative genomics of the pIPO2/pSB102 family of environmental plasmids: sequence, evolution, and ecology of pTer331 isolated from Collimonas fungivorans Ter331. FEMS Microbiol Ecol. 66(1):45-62. [PMID:18355297] |
![]() | 140 |
![]() | pTer331 |
![]() | NC_010332.1 |
![]() | PromA |
![]() | 40457 bp |
![]() | 10770..10811 [-] |
![]() | _ |
![]() | _ |
![]() | _ |
![]() | _ |
![]() | Collimonas fungivorans Ter331 [1005048] |