oriTDB

The information of the oriT region

oriTDB accession number	100131
Name	oriT_pEC34A
Sequence Completeness	intact
oriT length	108 nt
oriT sequence	TATCTGACATGGGTGTCGGGGCAAAGCCCTGACCAGGGTAATTGTAATAGCGTGCATGCA TGCGCGGTATAACAATTACACATCCTGTCCTGTCAGCAAGTTCGAATT
IR (inverted repeat)	[38-57] [60-79] nt (GTAATTGTAATAGCGTGCAT..ATGCGCGGTATAACAATTAC)
Location of nic site	[87-88] nt
Conserved sequence flanking the nic site	CATCCTG\|T
Note	_
	L:38-57;R:60-79;D:87-88

Visualization of oriT structure

1...5....10....15....20....25....30....35....40....45....50....55....60

1

TATCTGACATGGGTGTCGGGGCAAAGCCCTGACCAGGGTAATTGTAATAGCGTGCATGCA

61

TGCGCGGTATAACAATTACACATCCTGTCCTGTCAGCAAGTTCGAATT

Reference
N/A

N/A

Information of plasmid

ID	126
Plasmid name	pEC34A
GenBank accession number	NC_019077.1
Genome size	3770 bp
Coordinate of oriT [Strand]
Drug resistance	_
Heavy-metal resistance	_
Virulence factor	_
Xenobiotic degradation	_
Host bacterium [NCBI Taxonomy ID]	Escherichia coli NCTC 9034 [562]

Reference
N/A