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oriT
Relaxosome
T4CP
Plasmid&Host
The information of the
oriT
region
oriT
DB accession number
100129
Name
oriT
_pEC886
Sequence Completeness
intact
oriT
length
88 nt
oriT
sequence
TCAGCGGGTGTCGGGGCGAAACCCTGACCCAGTCGCGTAGCGACAGCGGAGTGTATACTG GCTTAACCATGCGGCATCAGTGCAGATT
IR (inverted repeat)
[32-36] [40-44] nt
(GTCGC..GCGAC)
Location of
nic
site
[61-62] nt
Conserved sequence flanking the
nic
site
CTGG|CTTA
Note
ColE1 superfamily
L:32-36;R:40-44;D:61-62
Visualization of
oriT
structure
Reference
N/A
N/A
N/A
Information of plasmid
ID
124
Plasmid name
pEC886
GenBank accession number
NC_019079.1
Genome size
9261 bp
Coordinate of
oriT
[Strand]
3500..3587
[-]
Drug resistance
_
Heavy-metal resistance
_
Virulence factor
_
Xenobiotic degradation
_
Host bacterium [NCBI Taxonomy ID]
Escherichia coli
886 [
562
]
Reference
N/A